Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC244517.1-201ENST00000606030 2086 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 EI24P1-201ENST00000416584 867 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC009518.2-201ENST00000418056 731 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC093155.1-201ENST00000440164 826 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.98□□□□□ -2.09
COL5A1P20908 AL606662.1-201ENST00000445763 553 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 MTCO2P25-201ENST00000447065 681 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC011979.1-201ENST00000472300 483 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.98□□□□□ -2.09
COL5A1P20908 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL5A1P20908 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.98□□□□□ -2.09
COL5A1P20908 AP000889.2-201ENST00000532684 490 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC004217.3-201ENST00000551552 878 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 MTCYBP27-201ENST00000555160 670 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AL512347.1-201ENST00000566420 503 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.98□□□□□ -2.09
COL5A1P20908 TUSC7.1-201ENST00000610969 165 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
COL5A1P20908 AC010680.1-201ENST00000590024 3590 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC096656.1-201ENST00000623826 1364 ntBASIC1.98□□□□□ -2.09
COL5A1P20908 AC011978.2-201ENST00000569835 2054 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.97□□□□□ -2.09
COL5A1P20908 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 SNORD116-9-201ENST00000384000 95 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 RNU6-356P-201ENST00000384140 107 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 SNORD116-3-201ENST00000384287 95 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 SNORD116-7-201ENST00000384404 95 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 SNORD116-5-201ENST00000384462 95 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL5A1P20908 PRELID3BP11-201ENST00000414230 479 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 RPL23AP39-201ENST00000415533 405 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.97□□□□□ -2.09
COL5A1P20908 AC005517.2-201ENST00000424673 553 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.97□□□□□ -2.09
COL5A1P20908 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.97□□□□□ -2.09
COL5A1P20908 YWHAZP8-201ENST00000436935 731 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC003989.2-201ENST00000440224 169 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC092473.1-201ENST00000441098 221 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 MTCYBP3-201ENST00000445588 1137 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.97□□□□□ -2.09
COL5A1P20908 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.97□□□□□ -2.09
COL5A1P20908 BX248409.1-201ENST00000455497 255 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 MTND1P16-201ENST00000465177 898 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.97□□□□□ -2.09
COL5A1P20908 AC116353.3-201ENST00000511215 249 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.97□□□□□ -2.09
COL5A1P20908 MRPS33P3-201ENST00000513456 322 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 FAM92A1P1-201ENST00000528023 890 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 OSBPL9P5-201ENST00000542581 171 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.97□□□□□ -2.09
COL5A1P20908 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.97□□□□□ -2.09
COL5A1P20908 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 AC112220.3-201ENST00000605502 502 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC080013.6-201ENST00000606185 215 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC108479.2-201ENST00000617314 601 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC002064.3-201ENST00000623448 346 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 AC007490.1-201ENST00000624321 703 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 MTND4P35-201ENST00000604257 1375 ntBASIC1.97□□□□□ -2.09
COL5A1P20908 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
COL5A1P20908 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL5A1P20908 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL5A1P20908 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
COL5A1P20908 Y_RNA.408-201ENST00000383987 102 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 U8.10-201ENST00000384260 133 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 RNU4-62P-201ENST00000410125 130 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.96□□□□□ -2.1
COL5A1P20908 BTF3P4-201ENST00000418852 495 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 MRPS36P1-201ENST00000421291 307 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 MTND4P20-201ENST00000424125 869 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 RPL31P54-201ENST00000429803 370 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 USP9YP22-201ENST00000438971 294 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 AL034418.1-201ENST00000448675 860 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 COX6CP18-201ENST00000448769 222 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.96□□□□□ -2.1
COL5A1P20908 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.96□□□□□ -2.1
COL5A1P20908 AC104472.2-201ENST00000469035 601 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 AC015724.1-201ENST00000478577 156 ntBASIC1.96□□□□□ -2.1
COL5A1P20908 AC078918.1-201ENST00000498515 228 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms