Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.33□□□□□ -1.72
ATF4P18848 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.33□□□□□ -1.72
ATF4P18848 RPL12P3-201ENST00000440080 396 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC124916.1-201ENST00000444020 547 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AL451050.1-201ENST00000450126 415 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.33□□□□□ -1.72
ATF4P18848 RPL26P9-201ENST00000457466 433 ntBASIC4.33□□□□□ -1.72
ATF4P18848 MIR2053-201ENST00000459295 91 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC133134.1-201ENST00000466800 359 ntBASIC4.33□□□□□ -1.72
ATF4P18848 RN7SL570P-201ENST00000484405 292 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AL163540.1-201ENST00000485382 386 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC093270.2-201ENST00000486157 792 ntBASIC4.33□□□□□ -1.72
ATF4P18848 UBE2CP3-201ENST00000502715 450 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC020593.1-201ENST00000507399 299 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.33□□□□□ -1.72
ATF4P18848 SMURF2P1-201ENST00000514992 481 ntBASIC4.33□□□□□ -1.72
ATF4P18848 SCARNA21.2-201ENST00000516600 166 ntBASIC4.33□□□□□ -1.72
ATF4P18848 RNU6-264P-201ENST00000517134 104 ntBASIC4.33□□□□□ -1.72
ATF4P18848 RNU6-988P-201ENST00000519081 107 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AP004607.1-201ENST00000524456 203 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.33□□□□□ -1.72
ATF4P18848 AC109446.1-201ENST00000566172 220 ntBASIC4.33□□□□□ -1.72
ATF4P18848 MIR4273-201ENST00000582824 84 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 AC009314.1-201ENST00000603871 304 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC008962.1-201ENST00000605729 304 ntBASIC4.33□□□□□ -1.72
ATF4P18848 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 PLCE1P1-201ENST00000622094 305 ntBASIC4.33□□□□□ -1.72
ATF4P18848 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ATF4P18848 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATF4P18848 AL672167.1-203ENST00000641299 2975 ntBASIC4.33□□□□□ -1.72
ATF4P18848 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.33□□□□□ -1.72
ATF4P18848 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
ATF4P18848 C4BPAP1-201ENST00000415474 1893 ntBASIC4.32□□□□□ -1.72
ATF4P18848 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ATF4P18848 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
ATF4P18848 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ATF4P18848 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.32□□□□□ -1.72
ATF4P18848 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF4P18848 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF4P18848 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATF4P18848 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATF4P18848 RN7SKP103-201ENST00000363848 320 ntBASIC4.32□□□□□ -1.72
ATF4P18848 RNU6-596P-201ENST00000365395 98 ntBASIC4.32□□□□□ -1.72
ATF4P18848 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF4P18848 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATF4P18848 AL117339.3-201ENST00000418733 162 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AL121776.1-201ENST00000429337 372 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AL133396.1-201ENST00000432048 687 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AC004938.1-201ENST00000438468 308 ntBASIC4.32□□□□□ -1.72
ATF4P18848 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF4P18848 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF4P18848 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF4P18848 FTH1P25-201ENST00000447665 469 ntBASIC4.32□□□□□ -1.72
ATF4P18848 SCARNA10-201ENST00000459255 330 ntBASIC4.32□□□□□ -1.72
ATF4P18848 PPIAP15-201ENST00000479662 484 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AC020890.1-201ENST00000491837 504 ntBASIC4.32□□□□□ -1.72
ATF4P18848 Y_RNA.711-201ENST00000516993 102 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.32□□□□□ -1.72
ATF4P18848 ELOCP31-201ENST00000540463 467 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AC091516.1-201ENST00000549191 703 ntBASIC4.32□□□□□ -1.72
ATF4P18848 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.32□□□□□ -1.72
ATF4P18848 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF4P18848 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.32□□□□□ -1.72
ATF4P18848 AC011626.1-201ENST00000604710 562 ntBASIC4.32□□□□□ -1.72
ATF4P18848 AC023043.4-201ENST00000612081 449 ntBASIC4.32□□□□□ -1.72
ATF4P18848 uc_338.22-201ENST00000622722 187 ntBASIC4.32□□□□□ -1.72
ATF4P18848 FP236240.3-201ENST00000623061 327 ntBASIC4.32□□□□□ -1.72
ATF4P18848 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.32□□□□□ -1.72
ATF4P18848 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.32□□□□□ -1.72
ATF4P18848 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATF4P18848 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.32□□□□□ -1.72
ATF4P18848 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATF4P18848 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF4P18848 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 AC007823.1-201ENST00000569932 1566 ntBASIC4.31□□□□□ -1.72
ATF4P18848 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATF4P18848 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
ATF4P18848 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATF4P18848 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 RNU6-1317P-201ENST00000364582 104 ntBASIC4.31□□□□□ -1.72
ATF4P18848 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF4P18848 SNORD56.6-201ENST00000384569 71 ntBASIC4.31□□□□□ -1.72
ATF4P18848 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATF4P18848 AL645733.1-201ENST00000402250 217 ntBASIC4.31□□□□□ -1.72
ATF4P18848 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC099548.1-201ENST00000421443 426 ntBASIC4.31□□□□□ -1.72
ATF4P18848 RPL23AP82-202ENST00000427528 469 ntBASIC4.31□□□□□ -1.72
ATF4P18848 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF4P18848 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 AL136038.1-201ENST00000497246 351 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms