Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
ERCC2P18074 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ERCC2P18074 FTLP6-201ENST00000355274 422 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 RNU5E-5P-201ENST00000365379 116 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 Y_RNA.608-201ENST00000410647 95 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 ZNF863P-201ENST00000426746 417 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC010153.1-201ENST00000432862 727 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.12□□□□□ -1.91
ERCC2P18074 AC129850.1-201ENST00000436203 508 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC098826.2-201ENST00000452011 651 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.12□□□□□ -1.91
ERCC2P18074 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC116337.2-201ENST00000477662 156 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC233702.1-201ENST00000482905 502 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC109486.1-201ENST00000486833 374 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.12□□□□□ -1.91
ERCC2P18074 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.12□□□□□ -1.91
ERCC2P18074 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.12□□□□□ -1.91
ERCC2P18074 MIR3118-1-201ENST00000581787 76 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.12□□□□□ -1.91
ERCC2P18074 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AP000860.1-201ENST00000605250 559 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 uc_338.12-201ENST00000616344 181 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 AC091953.2-201ENST00000623979 160 ntBASIC3.12□□□□□ -1.91
ERCC2P18074 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.12□□□□□ -1.91
ERCC2P18074 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ERCC2P18074 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
ERCC2P18074 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC092104.1-201ENST00000497346 1441 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERCC2P18074 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERCC2P18074 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 RNU6-1027P-201ENST00000383998 107 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ERCC2P18074 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AF228730.1-201ENST00000397972 663 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AL139397.2-201ENST00000404529 772 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 NDUFS5P1-201ENST00000405668 289 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 RNU2-62P-201ENST00000410868 191 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 RPL17P12-201ENST00000413391 526 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 ARPC3P1-201ENST00000437218 533 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 UBE2D3P4-201ENST00000441973 436 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AC138853.1-201ENST00000503549 823 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 PSMA2P1-201ENST00000526365 646 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC2P18074 AL031775.1-201ENST00000607014 887 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AL442067.2-201ENST00000614033 363 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 AC008147.4-201ENST00000617570 1204 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC019226.2-201ENST00000625973 424 ntBASIC3.11□□□□□ -1.91
ERCC2P18074 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC2P18074 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ERCC2P18074 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ERCC2P18074 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.1□□□□□ -1.91
ERCC2P18074 FCF1P10-201ENST00000407590 479 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 MTND2P18-201ENST00000419962 1030 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.1□□□□□ -1.91
ERCC2P18074 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 AL356583.2-201ENST00000426536 280 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.1□□□□□ -1.91
ERCC2P18074 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 COX6CP12-201ENST00000446748 202 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.1□□□□□ -1.91
ERCC2P18074 USP9YP12-201ENST00000450481 570 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 SSXP1-201ENST00000453640 473 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 RPL12P25-201ENST00000455592 494 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 AC013267.1-201ENST00000458227 267 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 snoU13.22-201ENST00000459428 104 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 AC087588.1-201ENST00000462203 316 ntBASIC3.1□□□□□ -1.91
ERCC2P18074 MTND4LP3-201ENST00000468320 276 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms