Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.91□□□□□ -2.26
VCANP13611 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.91□□□□□ -2.26
VCANP13611 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.91□□□□□ -2.26
VCANP13611 MIR5694-201ENST00000581190 76 ntBASIC0.91□□□□□ -2.26
VCANP13611 AC068620.4-201ENST00000636730 1182 ntBASIC0.91□□□□□ -2.26
VCANP13611 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.9□□□□□ -2.26
VCANP13611 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.9□□□□□ -2.27
VCANP13611 OR6C66P-201ENST00000414917 930 ntBASIC0.9□□□□□ -2.27
VCANP13611 BZW1P2-201ENST00000473537 826 ntBASIC0.9□□□□□ -2.27
VCANP13611 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
VCANP13611 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.9□□□□□ -2.27
VCANP13611 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.9□□□□□ -2.27
VCANP13611 MTND5P11-201ENST00000511037 1812 ntBASIC0.89□□□□□ -2.27
VCANP13611 HMGB3P30-201ENST00000457863 606 ntBASIC0.89□□□□□ -2.27
VCANP13611 RPL7P18-201ENST00000478965 734 ntBASIC0.89□□□□□ -2.27
VCANP13611 AC026801.1-201ENST00000497178 464 ntBASIC0.89□□□□□ -2.27
VCANP13611 ACTR3BP3-201ENST00000565577 979 ntBASIC0.89□□□□□ -2.27
VCANP13611 AC009901.1-201ENST00000506703 541 ntBASIC0.89□□□□□ -2.27
VCANP13611 RPL37P25-201ENST00000507308 276 ntBASIC0.89□□□□□ -2.27
VCANP13611 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.89□□□□□ -2.27
VCANP13611 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.89□□□□□ -2.27
VCANP13611 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.89□□□□□ -2.27
VCANP13611 RNA5SP499-201ENST00000363982 119 ntBASIC0.88□□□□□ -2.27
VCANP13611 MTND4LP3-201ENST00000468320 276 ntBASIC0.88□□□□□ -2.27
VCANP13611 MRPS33P3-201ENST00000513456 322 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC022387.2-201ENST00000604050 448 ntBASIC0.88□□□□□ -2.27
VCANP13611 AP006248.3-201ENST00000623580 594 ntBASIC0.88□□□□□ -2.27
VCANP13611 RPL21P90-201ENST00000415692 466 ntBASIC0.88□□□□□ -2.27
VCANP13611 OR5AQ1P-201ENST00000527596 927 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC006001.4-201ENST00000622243 395 ntBASIC0.88□□□□□ -2.27
VCANP13611 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.88□□□□□ -2.27
VCANP13611 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.88□□□□□ -2.27
VCANP13611 AL118496.1-201ENST00000440201 1812 ntBASIC0.88□□□□□ -2.27
VCANP13611 MIR365B-201ENST00000362317 111 ntBASIC0.88□□□□□ -2.27
VCANP13611 RNU6-942P-201ENST00000363002 107 ntBASIC0.88□□□□□ -2.27
VCANP13611 RNA5SP511-201ENST00000410487 115 ntBASIC0.88□□□□□ -2.27
VCANP13611 RNA5SP498-201ENST00000411342 120 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC093510.2-201ENST00000562820 896 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC133485.1-201ENST00000567176 124 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC138907.6-201ENST00000568401 126 ntBASIC0.88□□□□□ -2.27
VCANP13611 AC005786.1-201ENST00000588553 154 ntBASIC0.88□□□□□ -2.27
VCANP13611 MIR1468-201ENST00000410600 86 ntBASIC0.87□□□□□ -2.27
VCANP13611 AL022718.1-201ENST00000412004 84 ntBASIC0.87□□□□□ -2.27
VCANP13611 AC005908.1-201ENST00000468701 347 ntBASIC0.87□□□□□ -2.27
VCANP13611 AC023141.11-201ENST00000508864 202 ntBASIC0.87□□□□□ -2.27
VCANP13611 AC125611.2-201ENST00000551907 647 ntBASIC0.87□□□□□ -2.27
VCANP13611 MIR4514-201ENST00000581410 57 ntBASIC0.87□□□□□ -2.27
VCANP13611 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
VCANP13611 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
VCANP13611 RPL23AP32-201ENST00000395315 459 ntBASIC0.87□□□□□ -2.27
VCANP13611 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.87□□□□□ -2.27
VCANP13611 PTGES3P5-201ENST00000455109 434 ntBASIC0.87□□□□□ -2.27
VCANP13611 RPS23P3-201ENST00000470993 430 ntBASIC0.87□□□□□ -2.27
VCANP13611 SETP2-201ENST00000553886 926 ntBASIC0.87□□□□□ -2.27
VCANP13611 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
VCANP13611 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
VCANP13611 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.87□□□□□ -2.27
VCANP13611 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.87□□□□□ -2.27
VCANP13611 IGLVI-20-201ENST00000519296 130 ntBASIC0.87□□□□□ -2.27
VCANP13611 AC104997.1-201ENST00000519761 717 ntBASIC0.87□□□□□ -2.27
VCANP13611 MZT1P2-201ENST00000604387 248 ntBASIC0.87□□□□□ -2.27
VCANP13611 AP002967.1-201ENST00000624203 539 ntBASIC0.87□□□□□ -2.27
VCANP13611 RNU6-72P-201ENST00000384285 79 ntBASIC0.86□□□□□ -2.27
VCANP13611 SUMO1P4-201ENST00000429430 302 ntBASIC0.86□□□□□ -2.27
VCANP13611 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.86□□□□□ -2.27
VCANP13611 SNORD14B-201ENST00000364533 90 ntBASIC0.86□□□□□ -2.27
VCANP13611 RNU6-234P-201ENST00000365229 104 ntBASIC0.86□□□□□ -2.27
VCANP13611 AC018437.1-201ENST00000492214 406 ntBASIC0.86□□□□□ -2.27
VCANP13611 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.86□□□□□ -2.27
VCANP13611 AC241377.1-201ENST00000619797 406 ntBASIC0.86□□□□□ -2.27
VCANP13611 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.86□□□□□ -2.27
VCANP13611 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
VCANP13611 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
VCANP13611 USP12PX-201ENST00000432383 1057 ntBASIC0.85□□□□□ -2.27
VCANP13611 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VCANP13611 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VCANP13611 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
VCANP13611 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VCANP13611 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.85□□□□□ -2.27
VCANP13611 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.85□□□□□ -2.27
VCANP13611 AL022238.1-201ENST00000442557 355 ntBASIC0.85□□□□□ -2.27
VCANP13611 MTND4LP24-201ENST00000572277 291 ntBASIC0.85□□□□□ -2.27
VCANP13611 MIR3122-201ENST00000577243 73 ntBASIC0.85□□□□□ -2.27
VCANP13611 AC005156.1-201ENST00000613371 573 ntBASIC0.85□□□□□ -2.27
VCANP13611 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.85□□□□□ -2.27
VCANP13611 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.85□□□□□ -2.27
VCANP13611 MIR329-1-201ENST00000385028 80 ntBASIC0.85□□□□□ -2.27
VCANP13611 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.85□□□□□ -2.27
VCANP13611 SNORD97-201ENST00000459187 142 ntBASIC0.85□□□□□ -2.27
VCANP13611 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.85□□□□□ -2.27
VCANP13611 AL078605.1-201ENST00000603529 500 ntBASIC0.85□□□□□ -2.27
VCANP13611 XIST_intron.1-201ENST00000619444 68 ntBASIC0.85□□□□□ -2.27
VCANP13611 AL500527.1-201ENST00000448532 255 ntBASIC0.84□□□□□ -2.27
VCANP13611 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.84□□□□□ -2.27
VCANP13611 AC010620.1-201ENST00000601088 1102 ntBASIC0.84□□□□□ -2.27
VCANP13611 AL161722.3-201ENST00000605789 2983 ntBASIC0.84□□□□□ -2.27
VCANP13611 AC131280.1-202ENST00000624067 4211 ntBASIC0.84□□□□□ -2.27
VCANP13611 AC112198.4-201ENST00000515450 351 ntBASIC0.84□□□□□ -2.28
VCANP13611 RNU6-56P-201ENST00000516986 93 ntBASIC0.84□□□□□ -2.28
VCANP13611 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms