Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PRELID3BP4-201ENST00000515476 571 ntBASIC1.53□□□□□ -2.16
TOP2AP11388 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.53□□□□□ -2.16
TOP2AP11388 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TOP2AP11388 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.53□□□□□ -2.17
TOP2AP11388 AC010099.1-201ENST00000455434 375 ntBASIC1.52□□□□□ -2.17
TOP2AP11388 RPS15AP34-201ENST00000487776 387 ntBASIC1.52□□□□□ -2.17
TOP2AP11388 ERHP1-201ENST00000523006 310 ntBASIC1.52□□□□□ -2.17
TOP2AP11388 AC107214.2-201ENST00000608204 634 ntBASIC1.52□□□□□ -2.17
TOP2AP11388 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TOP2AP11388 AC073055.1-201ENST00000456901 1621 ntBASIC1.52□□□□□ -2.17
TOP2AP11388 RNU6-600P-201ENST00000362524 99 ntBASIC1.51□□□□□ -2.17
TOP2AP11388 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP2AP11388 AL022400.1-201ENST00000423946 935 ntBASIC1.51□□□□□ -2.17
TOP2AP11388 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP2AP11388 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.51□□□□□ -2.17
TOP2AP11388 AC093155.1-201ENST00000440164 826 ntBASIC1.51□□□□□ -2.17
TOP2AP11388 AC021087.2-201ENST00000504656 1203 ntBASIC1.51□□□□□ -2.17
TOP2AP11388 AC087854.1-201ENST00000519706 414 ntBASIC1.51□□□□□ -2.17
TOP2AP11388 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP2AP11388 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.51□□□□□ -2.17
TOP2AP11388 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.51□□□□□ -2.17
TOP2AP11388 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
TOP2AP11388 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
TOP2AP11388 Y_RNA.30-201ENST00000362572 97 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 RNA5SP139-201ENST00000364340 117 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 MTATP6P4-201ENST00000427725 675 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 THAP5P1-201ENST00000439089 262 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 AC021382.1-201ENST00000483523 359 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.5□□□□□ -2.17
TOP2AP11388 OSBPL9P3-201ENST00000534523 595 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 LLPHP1-201ENST00000603571 367 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TOP2AP11388 RNU6-1072P-201ENST00000384703 107 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 RNU6-443P-201ENST00000384780 107 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.5□□□□□ -2.17
TOP2AP11388 NF1P3-201ENST00000457709 450 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 SNORA31.20-201ENST00000517111 133 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 AC008676.3-201ENST00000521237 435 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.5□□□□□ -2.17
TOP2AP11388 AC090525.3-201ENST00000605601 189 ntBASIC1.5□□□□□ -2.17
TOP2AP11388 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TOP2AP11388 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.49□□□□□ -2.17
TOP2AP11388 CBX3P6-201ENST00000430257 527 ntBASIC1.49□□□□□ -2.17
TOP2AP11388 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.49□□□□□ -2.17
TOP2AP11388 TRIM60P13-201ENST00000432350 1283 ntBASIC1.49□□□□□ -2.17
TOP2AP11388 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TOP2AP11388 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.49□□□□□ -2.17
TOP2AP11388 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
TOP2AP11388 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.49□□□□□ -2.17
TOP2AP11388 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TOP2AP11388 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TOP2AP11388 AC109809.1-201ENST00000619665 545 ntBASIC1.49□□□□□ -2.17
TOP2AP11388 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.48□□□□□ -2.17
TOP2AP11388 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
TOP2AP11388 RNU6-1181P-201ENST00000384191 106 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 CISD1P1-201ENST00000393907 327 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 SNRPEP4-201ENST00000435815 279 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.48□□□□□ -2.17
TOP2AP11388 RPL31P58-201ENST00000469001 379 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.48□□□□□ -2.17
TOP2AP11388 AC096751.1-202ENST00000502691 1067 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.48□□□□□ -2.17
TOP2AP11388 AC022447.3-201ENST00000506865 495 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 RN7SKP34-201ENST00000516142 244 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 HMGB1P46-201ENST00000520062 610 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.48□□□□□ -2.17
TOP2AP11388 SNORD39.2-201ENST00000579995 76 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.48□□□□□ -2.17
TOP2AP11388 AL355297.2-201ENST00000604792 129 ntBASIC1.48□□□□□ -2.17
TOP2AP11388 AC018630.2-201ENST00000534866 2403 ntBASIC1.47□□□□□ -2.17
TOP2AP11388 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TOP2AP11388 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP2AP11388 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP2AP11388 AL596276.1-201ENST00000434465 418 ntBASIC1.47□□□□□ -2.17
TOP2AP11388 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP2AP11388 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.47□□□□□ -2.17
TOP2AP11388 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TOP2AP11388 MIR216A-201ENST00000385063 110 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 MIR676-201ENST00000390702 67 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 MTCO3P46-201ENST00000425787 232 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 AC007560.1-201ENST00000426912 237 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 AC079780.1-201ENST00000428259 207 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.46□□□□□ -2.18
TOP2AP11388 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TOP2AP11388 AL500527.1-201ENST00000448532 255 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.46□□□□□ -2.18
TOP2AP11388 AC078857.1-201ENST00000469870 667 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 KATNBL1P4-201ENST00000503545 918 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 AC114801.2-201ENST00000503825 781 ntBASIC1.46□□□□□ -2.18
TOP2AP11388 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.46□□□□□ -2.18
TOP2AP11388 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.46□□□□□ -2.18
TOP2AP11388 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
TOP2AP11388 AC118469.1-201ENST00000442943 488 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.45□□□□□ -2.18
TOP2AP11388 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TOP2AP11388 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.45□□□□□ -2.18
TOP2AP11388 AP001486.3-201ENST00000615334 372 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AC006065.5-201ENST00000623427 349 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AC025048.6-202ENST00000627667 438 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 MIR625-201ENST00000385047 85 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms