Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 THAP12P5-201ENST00000405864 2275 ntBASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CSB-PGBD3P0DP91 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CSB-PGBD3P0DP91 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.96□□□□□ -1.45
CSB-PGBD3P0DP91 TPTE2P4-201ENST00000258589 1605 ntBASIC5.96□□□□□ -1.45
CSB-PGBD3P0DP91 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.96□□□□□ -1.45
CSB-PGBD3P0DP91 AC011755.1-201ENST00000623763 2049 ntBASIC5.96□□□□□ -1.45
CSB-PGBD3P0DP91 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP283-201ENST00000365604 119 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.428-201ENST00000384078 102 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 MIR450B-201ENST00000401182 78 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AL080315.1-201ENST00000406055 466 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RPL30P2-201ENST00000414021 291 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RPS23P10-201ENST00000416185 486 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AL162388.1-201ENST00000450912 352 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-1132P-201ENST00000459214 107 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-189P-201ENST00000516120 101 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 SNORD116.3-201ENST00000517176 78 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AC131281.1-201ENST00000522984 164 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RANP3-201ENST00000530970 276 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AL137100.2-201ENST00000555786 315 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 TVP23BP1-201ENST00000557500 617 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 HMGB3P26-201ENST00000560051 582 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 MIR3128-201ENST00000581957 66 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 AC078899.3-201ENST00000599065 212 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 CPHL1P-201ENST00000461341 3407 ntBASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CSB-PGBD3P0DP91 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.60-201ENST00000362831 98 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP187-201ENST00000384400 119 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-550P-201ENST00000391057 101 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 PPIAP31-201ENST00000405422 495 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC079809.1-201ENST00000415468 276 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 PPP1R11P2-201ENST00000423543 382 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AL451062.2-201ENST00000427515 271 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 CALM2P2-201ENST00000428512 440 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC236972.1-201ENST00000433225 199 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 SNAP23P1-201ENST00000433229 246 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 RPS11P1-201ENST00000451072 473 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 RPL21P8-201ENST00000465083 535 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 VN1R105P-201ENST00000486595 910 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 GZMAP1-201ENST00000503054 631 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AL355297.3-201ENST00000604082 446 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 SNORD58B-201ENST00000607313 66 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC140479.6-201ENST00000633535 357 ntBASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CSB-PGBD3P0DP91 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AL137003.2-201ENST00000606924 2538 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC104623.2-202ENST00000623477 4002 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-562P-201ENST00000362731 107 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.106-201ENST00000363189 100 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.210-201ENST00000364161 110 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 Y_RNA.350-201ENST00000365409 98 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RNU6-33P-201ENST00000384793 107 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RNA5SP219-201ENST00000390940 113 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 MTCO2P33-201ENST00000402100 465 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RN7SKP202-201ENST00000410439 330 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AL590632.1-201ENST00000424289 371 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RPL7L1P1-201ENST00000448259 785 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC012671.1-201ENST00000451912 203 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC090686.1-201ENST00000481577 749 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RBBP4P6-201ENST00000508098 202 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 RNU4-77P-201ENST00000516692 156 ntBASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.94□□□□□ -1.46
CSB-PGBD3P0DP91 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms