Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNRPA1P09661 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
SNRPA1P09661 XIAPP3-201ENST00000312918 795 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 RNU1-18P-201ENST00000363062 164 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 RNA5SP197-201ENST00000363357 119 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNRPA1P09661 RNU6-74P-201ENST00000384235 107 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AL391417.1-201ENST00000404100 426 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.34□□□□□ -1.71
SNRPA1P09661 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC093156.1-201ENST00000440382 670 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC093019.1-201ENST00000443135 252 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC079781.2-201ENST00000446424 169 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC140076.1-201ENST00000449897 361 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 CACYBPP2-201ENST00000453625 678 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AL049714.1-201ENST00000466686 347 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC017037.2-201ENST00000513850 890 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AL138976.2-201ENST00000563989 694 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AC055876.1-202ENST00000567053 138 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
SNRPA1P09661 COX6CP3-201ENST00000580869 223 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 GLUD1P4-201ENST00000590914 418 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC020914.4-201ENST00000597690 277 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 RNA5SP108-201ENST00000605921 117 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.34□□□□□ -1.71
SNRPA1P09661 AL354950.2-201ENST00000617939 290 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC002550.2-201ENST00000621246 394 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 AC138649.5-201ENST00000637456 137 ntBASIC4.34□□□□□ -1.71
SNRPA1P09661 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.34□□□□□ -1.71
SNRPA1P09661 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNRPA1P09661 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SNRPA1P09661 AL356489.2-201ENST00000566968 3528 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AL138713.1-201ENST00000624026 2130 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNRPA1P09661 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNRPA1P09661 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNRPA1P09661 Y_RNA.263-201ENST00000364659 114 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 RNA5SP235-201ENST00000365411 114 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 SNORD51-201ENST00000384320 80 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 Y_RNA.493-201ENST00000384422 102 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 MIR153-1-201ENST00000384914 90 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 RPL23AP48-201ENST00000406913 488 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 PSMA2P3-201ENST00000429685 675 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 FTH1P6-201ENST00000430768 320 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.33□□□□□ -1.72
SNRPA1P09661 RNU7-63P-201ENST00000459054 62 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC110794.1-201ENST00000505816 425 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 PCBP2P3-201ENST00000509726 843 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC114797.1-201ENST00000514003 728 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 RN7SKP234-201ENST00000517173 224 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.33□□□□□ -1.72
SNRPA1P09661 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNRPA1P09661 AL133271.1-201ENST00000538229 291 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.33□□□□□ -1.72
SNRPA1P09661 MIR5004-201ENST00000579078 107 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AC015917.1-201ENST00000579654 510 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AC005261.5-201ENST00000596280 355 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.33□□□□□ -1.72
SNRPA1P09661 AC103710.2-201ENST00000609912 942 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 DISC2.1-201ENST00000612827 205 ntBASIC4.33□□□□□ -1.72
SNRPA1P09661 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.33□□□□□ -1.72
SNRPA1P09661 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNRPA1P09661 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNRPA1P09661 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.32□□□□□ -1.72
SNRPA1P09661 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 TNPO1P3-201ENST00000436471 2662 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNRPA1P09661 RNU6-989P-201ENST00000362756 107 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 Y_RNA.356-201ENST00000365475 113 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 MIR128-1-201ENST00000384921 82 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 MT-TC-201ENST00000387405 66 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SNRPA1P09661 AL357075.1-201ENST00000404107 726 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AL354719.1-201ENST00000406535 843 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 RNA5SP118-201ENST00000410385 109 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 RNU2-47P-201ENST00000410649 186 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 MTND1P14-201ENST00000427400 950 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC006028.1-201ENST00000438379 402 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.32□□□□□ -1.72
SNRPA1P09661 AL357552.1-201ENST00000445254 415 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.32□□□□□ -1.72
SNRPA1P09661 AC133473.1-201ENST00000455173 299 ntBASIC4.32□□□□□ -1.72
SNRPA1P09661 AC006512.1-201ENST00000468816 291 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms