Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CXCL1P09341 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CXCL1P09341 USP9YP34-201ENST00000453983 808 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 MTND2P6-201ENST00000455337 1030 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.4□□□□□ -2.19
CXCL1P09341 AC126389.1-201ENST00000477436 290 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AL049874.1-201ENST00000489560 388 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC048346.1-201ENST00000510247 144 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC091965.2-201ENST00000512324 613 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC107393.1-201ENST00000512403 346 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.4□□□□□ -2.19
CXCL1P09341 HSPA8P13-201ENST00000523715 472 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AL132857.1-201ENST00000555180 708 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.4□□□□□ -2.19
CXCL1P09341 MIR4287-201ENST00000579398 78 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC005000.2-201ENST00000605468 310 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.4□□□□□ -2.19
CXCL1P09341 FTX_3.1-201ENST00000610451 147 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 DUXAP10-204ENST00000612052 616 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC005296.1-201ENST00000616145 209 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC012150.2-201ENST00000621300 544 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC244517.12-201ENST00000623581 663 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AL512506.2-201ENST00000624472 458 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 AC243829.7-201ENST00000633081 225 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CXCL1P09341 MFSD8-213ENST00000641134 1327 ntBASIC1.4□□□□□ -2.19
CXCL1P09341 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CXCL1P09341 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CXCL1P09341 RNU6-1159P-201ENST00000362933 107 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CXCL1P09341 MIR676-201ENST00000390702 67 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 U6atac.2-201ENST00000408644 118 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.39□□□□□ -2.19
CXCL1P09341 XKRYP1-201ENST00000423438 492 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 FAM204CP-201ENST00000424489 642 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 XKRYP2-201ENST00000432915 492 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.39□□□□□ -2.19
CXCL1P09341 AL353689.1-201ENST00000438895 199 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.39□□□□□ -2.19
CXCL1P09341 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.39□□□□□ -2.19
CXCL1P09341 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.39□□□□□ -2.19
CXCL1P09341 RPL21P134-201ENST00000453468 483 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 SUMO2P2-201ENST00000456482 255 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 snoU109.1-201ENST00000459339 135 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AL121769.1-201ENST00000469473 401 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AC107032.1-201ENST00000485945 480 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CXCL1P09341 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 SNORA31.6-201ENST00000516241 130 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 MIR1273D-201ENST00000577266 86 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 UBE2L4-201ENST00000587688 464 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AP001269.3-201ENST00000588718 329 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 DNAJC19P3-201ENST00000594491 331 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AL391813.1-201ENST00000603098 260 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 DUXAP11-201ENST00000603858 526 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 AC068276.1-201ENST00000605793 379 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.39□□□□□ -2.19
CXCL1P09341 AL445493.3-201ENST00000619568 477 ntBASIC1.39□□□□□ -2.19
CXCL1P09341 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.39□□□□□ -2.19
CXCL1P09341 AC010889.1-201ENST00000566193 2666 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL1P09341 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CXCL1P09341 MIR208A-201ENST00000362287 71 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CXCL1P09341 OR1L1-202ENST00000373686 1083 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 MIR147B-201ENST00000390185 80 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 RNU6-796P-201ENST00000391086 107 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AL031679.1-201ENST00000400616 525 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AL357078.2-201ENST00000416486 427 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.38□□□□□ -2.19
CXCL1P09341 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL1P09341 AL445646.1-201ENST00000431784 216 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 GTF2IP7-202ENST00000436677 309 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AL353691.1-201ENST00000451332 387 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL1P09341 RPL26P9-201ENST00000457466 433 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 RPL31P50-201ENST00000471002 296 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC025181.1-201ENST00000477507 416 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 SETP6-201ENST00000479329 568 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 RPL21P99-201ENST00000480369 423 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC104685.1-201ENST00000502445 371 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL1P09341 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.38□□□□□ -2.19
CXCL1P09341 AC114781.4-201ENST00000513707 639 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CXCL1P09341 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.38□□□□□ -2.19
CXCL1P09341 AP003066.2-201ENST00000529375 555 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.38□□□□□ -2.19
CXCL1P09341 AL359212.1-201ENST00000556608 614 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC106734.1-201ENST00000568646 663 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 MIR3618-201ENST00000580330 88 ntBASIC1.38□□□□□ -2.19
CXCL1P09341 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms