Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC090515.1-201ENST00000465295 476 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 HMGN2P13-201ENST00000476476 274 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC015908.1-201ENST00000478739 476 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC008427.1-201ENST00000503102 655 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 ARL4AP2-201ENST00000507378 601 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RNA5SP82-201ENST00000516707 92 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 RNU6-711P-201ENST00000517255 106 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 AC239860.2-201ENST00000525886 270 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A2P08572 MTCO3P15-201ENST00000526563 574 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MED28P6-201ENST00000558776 231 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 MIR3912-201ENST00000577566 105 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AP002826.1-201ENST00000608835 315 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 AC018926.1-201ENST00000616335 435 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
COL4A2P08572 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A2P08572 U6.101-201ENST00000637707 76 ntBASIC1.74□□□□□ -2.13
COL4A2P08572 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A2P08572 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A2P08572 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A2P08572 AL139276.1-201ENST00000311910 1001 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL4A2P08572 Y_RNA.355-201ENST00000365462 98 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 U3.29-201ENST00000391296 212 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 RPL22P22-201ENST00000395439 379 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 RPL7P27-201ENST00000403775 720 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC109780.2-201ENST00000413467 845 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 RPS7P9-201ENST00000414704 586 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.73□□□□□ -2.13
COL4A2P08572 AC013262.1-201ENST00000426710 252 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A2P08572 AC093155.1-201ENST00000440164 826 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 TAF9P1-201ENST00000445421 515 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.73□□□□□ -2.13
COL4A2P08572 TAF9P2-201ENST00000454958 515 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 SNRPGP9-201ENST00000456025 225 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A2P08572 MTND2P31-201ENST00000512602 616 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.73□□□□□ -2.13
COL4A2P08572 OR5AK1P-201ENST00000524837 922 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A2P08572 AC008127.2-201ENST00000549925 1075 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.73□□□□□ -2.13
COL4A2P08572 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A2P08572 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A2P08572 ZNF971P-201ENST00000562068 1249 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC104581.2-201ENST00000572227 430 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 COX6CP3-201ENST00000580869 223 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL031176.1-201ENST00000604554 466 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A2P08572 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC040168.1-201ENST00000623594 991 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AP003122.6-201ENST00000623831 495 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AC090740.1-201ENST00000623193 2262 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 MTND4P23-201ENST00000447723 1363 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL4A2P08572 AP002907.1-201ENST00000606361 1430 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 AL136164.4-201ENST00000625013 2135 ntBASIC1.73□□□□□ -2.13
COL4A2P08572 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A2P08572 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A2P08572 RNU6-468P-201ENST00000384003 109 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 SNORD51-201ENST00000384320 80 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC016769.3-201ENST00000396562 315 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A2P08572 RNU2-42P-201ENST00000410697 113 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A2P08572 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A2P08572 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A2P08572 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A2P08572 VN1R10P-201ENST00000447106 875 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 SUMO2P2-201ENST00000456482 255 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC092757.1-201ENST00000467293 467 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AL163540.1-201ENST00000485382 386 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.72□□□□□ -2.13
COL4A2P08572 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.72□□□□□ -2.13
COL4A2P08572 MTCO3P27-201ENST00000514397 196 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 IGLV3-17-201ENST00000519099 244 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC087894.1-201ENST00000538359 518 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC122134.1-202ENST00000569111 1201 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC090666.1-201ENST00000578241 445 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC103987.3-201ENST00000582071 292 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 GLUD1P4-201ENST00000590914 418 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC068620.3-201ENST00000602749 560 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 BX248123.2-201ENST00000606318 124 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC012360.2-201ENST00000609349 391 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AL390240.1-201ENST00000612950 384 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC012150.2-201ENST00000621300 544 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC109454.4-201ENST00000623411 649 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AL513185.3-201ENST00000433335 1300 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AC004520.1-201ENST00000608362 1413 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 MTCO1P23-201ENST00000415223 1526 ntBASIC1.72□□□□□ -2.13
COL4A2P08572 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.72□□□□□ -2.13
COL4A2P08572 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms