Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 AL590399.6-201ENST00000446396 307 ntBASIC3.38□□□□□ -1.87
NGFRP08138 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 MTND3P16-201ENST00000452205 344 ntBASIC3.38□□□□□ -1.87
NGFRP08138 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC004062.1-201ENST00000509926 645 ntBASIC3.38□□□□□ -1.87
NGFRP08138 MTCO3P44-201ENST00000510977 541 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.38□□□□□ -1.87
NGFRP08138 AC114797.1-201ENST00000514003 728 ntBASIC3.38□□□□□ -1.87
NGFRP08138 HIGD1AP3-201ENST00000515857 278 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RNU4-49P-201ENST00000516080 140 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RN7SKP219-201ENST00000516825 296 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RANP9-201ENST00000519957 271 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 AC008011.1-201ENST00000545989 227 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
NGFRP08138 AL442663.2-201ENST00000554385 511 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 AL121576.1-201ENST00000556055 276 ntBASIC3.38□□□□□ -1.87
NGFRP08138 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC010591.1-201ENST00000603941 649 ntBASIC3.38□□□□□ -1.87
NGFRP08138 RNU6-89P-201ENST00000606519 100 ntBASIC3.38□□□□□ -1.87
NGFRP08138 Y_RNA.812-201ENST00000610788 101 ntBASIC3.38□□□□□ -1.87
NGFRP08138 Y_RNA.784-201ENST00000613803 101 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AL590099.1-201ENST00000615276 138 ntBASIC3.38□□□□□ -1.87
NGFRP08138 Y_RNA.787-201ENST00000616522 101 ntBASIC3.38□□□□□ -1.87
NGFRP08138 Y_RNA.780-201ENST00000617336 101 ntBASIC3.38□□□□□ -1.87
NGFRP08138 Y_RNA.801-201ENST00000619005 101 ntBASIC3.38□□□□□ -1.87
NGFRP08138 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.38□□□□□ -1.87
NGFRP08138 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NGFRP08138 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NGFRP08138 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.38□□□□□ -1.87
NGFRP08138 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.38□□□□□ -1.87
NGFRP08138 AC004972.1-201ENST00000623934 2209 ntBASIC3.38□□□□□ -1.87
NGFRP08138 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NGFRP08138 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NGFRP08138 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NGFRP08138 Y_RNA.132-201ENST00000363421 102 ntBASIC3.37□□□□□ -1.87
NGFRP08138 RNU6-511P-201ENST00000363496 107 ntBASIC3.37□□□□□ -1.87
NGFRP08138 Y_RNA.231-201ENST00000364358 102 ntBASIC3.37□□□□□ -1.87
NGFRP08138 RNA5SP167-201ENST00000365461 116 ntBASIC3.37□□□□□ -1.87
NGFRP08138 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
NGFRP08138 U8.12-201ENST00000384701 133 ntBASIC3.37□□□□□ -1.87
NGFRP08138 MIR454-201ENST00000390180 115 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AL356967.1-201ENST00000406305 431 ntBASIC3.37□□□□□ -1.87
NGFRP08138 RNU6-193P-201ENST00000410977 107 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.37□□□□□ -1.87
NGFRP08138 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.37□□□□□ -1.87
NGFRP08138 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.37□□□□□ -1.87
NGFRP08138 NOTCH2P1-201ENST00000443481 624 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AC010655.1-201ENST00000449336 292 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
NGFRP08138 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
NGFRP08138 RNU6-329P-201ENST00000459618 107 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AL049714.1-201ENST00000466686 347 ntBASIC3.37□□□□□ -1.87
NGFRP08138 COX7A2P2-201ENST00000505291 250 ntBASIC3.37□□□□□ -1.87
NGFRP08138 TTC39CP1-201ENST00000512513 755 ntBASIC3.37□□□□□ -1.87
NGFRP08138 SNORA19.2-201ENST00000516013 114 ntBASIC3.37□□□□□ -1.87
NGFRP08138 Y_RNA.691-201ENST00000516611 103 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AP005597.4-201ENST00000526762 229 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AC128657.1-201ENST00000549459 145 ntBASIC3.37□□□□□ -1.87
NGFRP08138 PSMA3P-201ENST00000555485 635 ntBASIC3.37□□□□□ -1.87
NGFRP08138 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.37□□□□□ -1.87
NGFRP08138 AC007687.1-201ENST00000602704 304 ntBASIC3.37□□□□□ -1.87
NGFRP08138 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.37□□□□□ -1.87
NGFRP08138 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.37□□□□□ -1.87
NGFRP08138 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.37□□□□□ -1.87
NGFRP08138 AL732372.2-225ENST00000642124 456 ntBASIC3.37□□□□□ -1.87
NGFRP08138 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NGFRP08138 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NGFRP08138 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.36□□□□□ -1.87
NGFRP08138 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.36□□□□□ -1.87
NGFRP08138 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.36□□□□□ -1.87
NGFRP08138 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NGFRP08138 Y_RNA.162-201ENST00000363683 102 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms