Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC114322.1-201ENST00000506771 926 ntBASIC0.6□□□□□ -2.31
APOBP04114 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.6□□□□□ -2.31
APOBP04114 CASP1P1-201ENST00000526345 212 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.6□□□□□ -2.31
APOBP04114 AL031775.1-201ENST00000607014 887 ntBASIC0.6□□□□□ -2.31
APOBP04114 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.6□□□□□ -2.31
APOBP04114 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.6□□□□□ -2.31
APOBP04114 AC023424.2-201ENST00000493479 777 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC096751.1-202ENST00000502691 1067 ntBASIC0.6□□□□□ -2.31
APOBP04114 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.6□□□□□ -2.31
APOBP04114 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
APOBP04114 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
APOBP04114 AC099654.7-201ENST00000635788 2127 ntBASIC0.6□□□□□ -2.31
APOBP04114 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
APOBP04114 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
APOBP04114 MTCO1P43-201ENST00000431831 488 ntBASIC0.59□□□□□ -2.31
APOBP04114 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.59□□□□□ -2.31
APOBP04114 RPL7P18-201ENST00000478965 734 ntBASIC0.59□□□□□ -2.31
APOBP04114 AC008676.3-201ENST00000521237 435 ntBASIC0.59□□□□□ -2.31
APOBP04114 NBEAP1-201ENST00000554452 979 ntBASIC0.59□□□□□ -2.31
APOBP04114 AC021646.1-201ENST00000605469 484 ntBASIC0.59□□□□□ -2.31
APOBP04114 AC011472.4-201ENST00000615848 491 ntBASIC0.59□□□□□ -2.31
APOBP04114 Z69720.2-201ENST00000624755 279 ntBASIC0.59□□□□□ -2.31
APOBP04114 MIR338-201ENST00000636369 67 ntBASIC0.59□□□□□ -2.31
APOBP04114 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
APOBP04114 XKRY2-202ENST00000623874 1581 ntBASIC0.59□□□□□ -2.31
APOBP04114 XKRY-202ENST00000624960 1581 ntBASIC0.59□□□□□ -2.31
APOBP04114 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
APOBP04114 RNU1-62P-201ENST00000362599 164 ntBASIC0.59□□□□□ -2.31
APOBP04114 MIR144-201ENST00000384886 86 ntBASIC0.59□□□□□ -2.31
APOBP04114 AL355497.1-201ENST00000406262 551 ntBASIC0.59□□□□□ -2.31
APOBP04114 RNA5SP498-201ENST00000411342 120 ntBASIC0.59□□□□□ -2.31
APOBP04114 USP9YP33-201ENST00000412220 421 ntBASIC0.59□□□□□ -2.31
APOBP04114 SNORD56-201ENST00000413522 71 ntBASIC0.59□□□□□ -2.31
APOBP04114 NUP35P2-201ENST00000416748 943 ntBASIC0.59□□□□□ -2.31
APOBP04114 AL691517.1-201ENST00000440833 1235 ntBASIC0.59□□□□□ -2.31
APOBP04114 MTND3P24-201ENST00000506306 329 ntBASIC0.59□□□□□ -2.31
APOBP04114 AC090897.2-201ENST00000581715 130 ntBASIC0.59□□□□□ -2.31
APOBP04114 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.59□□□□□ -2.31
APOBP04114 AC010889.1-201ENST00000566193 2666 ntBASIC0.59□□□□□ -2.32
APOBP04114 AC019070.1-201ENST00000415008 1024 ntBASIC0.59□□□□□ -2.32
APOBP04114 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.59□□□□□ -2.32
APOBP04114 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.59□□□□□ -2.32
APOBP04114 CDC42P4-201ENST00000510507 563 ntBASIC0.59□□□□□ -2.32
APOBP04114 HSPE1P4-201ENST00000550617 308 ntBASIC0.59□□□□□ -2.32
APOBP04114 EEF1B2P4-201ENST00000551398 348 ntBASIC0.59□□□□□ -2.32
APOBP04114 MTND4P27-201ENST00000450813 1354 ntBASIC0.59□□□□□ -2.32
APOBP04114 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
APOBP04114 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.59□□□□□ -2.32
APOBP04114 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.59□□□□□ -2.32
APOBP04114 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.59□□□□□ -2.32
APOBP04114 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.59□□□□□ -2.32
APOBP04114 OR5BM1P-201ENST00000512021 366 ntBASIC0.59□□□□□ -2.32
APOBP04114 MIR8087-201ENST00000612745 78 ntBASIC0.59□□□□□ -2.32
APOBP04114 RNU6-716P-201ENST00000365621 103 ntBASIC0.58□□□□□ -2.32
APOBP04114 MIR936-201ENST00000401264 98 ntBASIC0.58□□□□□ -2.32
APOBP04114 RNU4-65P-201ENST00000410473 140 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.58□□□□□ -2.32
APOBP04114 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.58□□□□□ -2.32
APOBP04114 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
APOBP04114 GDI2P2-201ENST00000445131 608 ntBASIC0.58□□□□□ -2.32
APOBP04114 RPL31P41-201ENST00000477967 372 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.58□□□□□ -2.32
APOBP04114 AL158032.1-201ENST00000605401 106 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC106052.1-201ENST00000608029 497 ntBASIC0.58□□□□□ -2.32
APOBP04114 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.58□□□□□ -2.32
APOBP04114 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.58□□□□□ -2.32
APOBP04114 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
APOBP04114 PRELID3BP11-201ENST00000414230 479 ntBASIC0.58□□□□□ -2.32
APOBP04114 HMGB3P10-201ENST00000434734 572 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC118469.1-201ENST00000442943 488 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.58□□□□□ -2.32
APOBP04114 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.58□□□□□ -2.32
APOBP04114 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.58□□□□□ -2.32
APOBP04114 AC211469.2-201ENST00000605461 205 ntBASIC0.58□□□□□ -2.32
APOBP04114 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.58□□□□□ -2.32
APOBP04114 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.58□□□□□ -2.32
APOBP04114 RPL30P6-201ENST00000475925 342 ntBASIC0.58□□□□□ -2.32
APOBP04114 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.58□□□□□ -2.32
APOBP04114 AP004247.1-201ENST00000531556 1289 ntBASIC0.58□□□□□ -2.32
APOBP04114 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
APOBP04114 ZNF37BP-203ENST00000452306 1352 ntBASIC0.58□□□□□ -2.32
APOBP04114 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 AC244035.1-201ENST00000430042 390 ntBASIC0.57□□□□□ -2.32
APOBP04114 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 RPS27P21-201ENST00000486977 252 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.57□□□□□ -2.32
APOBP04114 NOP56P3-201ENST00000549457 385 ntBASIC0.57□□□□□ -2.32
APOBP04114 DUXAP11-201ENST00000603858 526 ntBASIC0.57□□□□□ -2.32
APOBP04114 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.57□□□□□ -2.32
APOBP04114 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 AC068620.4-201ENST00000636730 1182 ntBASIC0.57□□□□□ -2.32
APOBP04114 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.57□□□□□ -2.32
APOBP04114 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.57□□□□□ -2.32
APOBP04114 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
APOBP04114 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
APOBP04114 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
APOBP04114 RNU4-52P-201ENST00000384209 138 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms