Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 GTF2IP9-201ENST00000502460 301 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND4P03905 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC024589.1-201ENST00000512207 263 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 NRON-201ENST00000517270 370 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 IGLV3-17-201ENST00000519099 244 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC109329.2-201ENST00000519658 482 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 ATP5F1P5-201ENST00000526403 760 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC121758.2-201ENST00000553271 193 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 MTCYBP23-201ENST00000558717 1102 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC011471.1-201ENST00000585766 187 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 VN1R90P-201ENST00000595717 726 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AL139344.1-201ENST00000605228 195 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC245297.2-201ENST00000610119 565 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC093838.1-201ENST00000613014 469 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC013476.2-201ENST00000614456 459 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC009269.6-201ENST00000621778 588 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC092608.2-201ENST00000624427 218 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 AC019226.1-201ENST00000625666 515 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 MIR4275-201ENST00000636486 87 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
MT-ND4P03905 DDX43P2-201ENST00000604753 1354 ntBASIC2.08□□□□□ -2.08
MT-ND4P03905 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
MT-ND4P03905 AC092447.10-201ENST00000620607 1652 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AL137003.2-201ENST00000606924 2538 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND4P03905 RNU6-741P-201ENST00000383889 107 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 RNU6-217P-201ENST00000384164 104 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 Y_RNA.465-201ENST00000384293 102 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 RNU6-516P-201ENST00000411381 104 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 VN1R51P-201ENST00000411675 945 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AL513331.1-201ENST00000411908 397 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 USP9YP33-201ENST00000412220 421 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AC063976.3-201ENST00000426849 329 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC007919.1-201ENST00000429380 217 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND4P03905 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 USP9YP35-201ENST00000435696 412 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 PIGFP3-201ENST00000441918 722 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AL031659.1-201ENST00000447075 539 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AP1S2P1-201ENST00000457344 379 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 snoU109.3-201ENST00000459477 145 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 RPS3AP14-201ENST00000483907 780 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC097462.2-201ENST00000504623 481 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.07□□□□□ -2.08
MT-ND4P03905 AC009127.3-201ENST00000570531 403 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 RPL23AP84-201ENST00000571193 464 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 RPS15AP11-201ENST00000594193 385 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 VN1R92P-201ENST00000598511 928 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AL356280.1-201ENST00000603614 379 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND4P03905 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC006386.1-201ENST00000619436 415 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 AC009268.2-201ENST00000621925 457 ntBASIC2.07□□□□□ -2.08
MT-ND4P03905 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND4P03905 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.07□□□□□ -2.08
MT-ND4P03905 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
MT-ND4P03905 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
MT-ND4P03905 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MT-ND4P03905 RNU6-7-201ENST00000364784 107 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 RNU6-8-201ENST00000365467 107 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AL139039.1-201ENST00000401900 692 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 RN7SKP140-201ENST00000411196 284 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 USP9YP27-201ENST00000418455 438 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 MORF4L1P6-201ENST00000418771 268 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC019097.1-201ENST00000424783 735 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 ARL5AP4-201ENST00000430731 512 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 GTF2IP20-201ENST00000431663 360 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.06□□□□□ -2.08
MT-ND4P03905 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 MTND1P9-201ENST00000453775 944 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC138853.1-201ENST00000503549 823 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.06□□□□□ -2.08
MT-ND4P03905 SNORA31.18-201ENST00000517043 134 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.06□□□□□ -2.08
MT-ND4P03905 AL391261.3-201ENST00000557194 520 ntBASIC2.06□□□□□ -2.08
MT-ND4P03905 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.06□□□□□ -2.08
MT-ND4P03905 MIR3200-201ENST00000580767 85 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms