Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF4O95639 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF4O95639 AP001429.1-201ENST00000602568 530 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 MTND3P19-201ENST00000603825 345 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
CPSF4O95639 AC140725.3-201ENST00000616193 880 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 AL445264.1-201ENST00000621719 171 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 DUXAP9-208ENST00000622815 614 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 SCARNA15.3-201ENST00000626315 122 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 SCARNA4.1-201ENST00000628597 123 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 AC110079.1-202ENST00000635213 138 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 MTND4P9-201ENST00000507819 1346 ntBASIC1.86□□□□□ -2.11
CPSF4O95639 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CPSF4O95639 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CPSF4O95639 RPL23AP29-201ENST00000397284 453 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AL136310.1-201ENST00000404926 654 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 RNU4-22P-201ENST00000411058 166 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AL356320.2-201ENST00000417263 507 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 RPS3AP37-201ENST00000419176 745 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 MYL8P-204ENST00000431574 518 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 OR4K11P-201ENST00000431829 904 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CPSF4O95639 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 EEF1A1P39-201ENST00000440791 250 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 OR10R1P-201ENST00000441524 1141 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4O95639 AC002381.1-201ENST00000447049 280 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF4O95639 ZNF886P-201ENST00000450781 723 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC010099.1-201ENST00000455434 375 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 FCF1P6-201ENST00000456841 595 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC128713.1-201ENST00000471495 306 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.85□□□□□ -2.11
CPSF4O95639 RPL9P6-201ENST00000492764 598 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CPSF4O95639 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4O95639 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4O95639 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF4O95639 RNU6-714P-201ENST00000516963 103 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF4O95639 DEFB131D-201ENST00000526803 184 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 COX6CP5-201ENST00000527162 228 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 FAM92A1P1-201ENST00000528023 890 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.85□□□□□ -2.11
CPSF4O95639 CYCSP2-201ENST00000558168 301 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 BBIP1P1-201ENST00000602999 279 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC011451.2-201ENST00000604303 598 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC131235.4-201ENST00000609288 620 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 MIR6895-201ENST00000613497 78 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AL357080.1-201ENST00000617394 239 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC002550.2-201ENST00000621246 394 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 AC008443.7-201ENST00000622195 246 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 MAPK10-266ENST00000641066 6555 ntBASIC1.85□□□□□ -2.11
CPSF4O95639 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.85□□□□□ -2.11
CPSF4O95639 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CPSF4O95639 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
CPSF4O95639 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CPSF4O95639 AL390862.1-201ENST00000635467 1469 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL359693.1-201ENST00000614959 2407 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL139276.1-201ENST00000311910 1001 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 RNU5A-1-201ENST00000362698 116 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CPSF4O95639 MIR620-201ENST00000385232 95 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 VN1R51P-201ENST00000411675 945 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MTATP6P20-201ENST00000414147 562 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4O95639 BX119904.4-201ENST00000424402 301 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 Z98742.2-201ENST00000431564 187 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 LSM1P1-201ENST00000438629 273 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MTND5P14-201ENST00000441481 1267 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 EXOSC3P1-201ENST00000448649 500 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL353705.4-201ENST00000449661 238 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4O95639 snoU13.8-201ENST00000458890 104 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 RPL30P9-201ENST00000465586 330 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
CPSF4O95639 AC147055.4-201ENST00000504399 745 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MTND3P3-201ENST00000505004 126 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4O95639 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.84□□□□□ -2.11
CPSF4O95639 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.84□□□□□ -2.11
CPSF4O95639 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 RNU6-150P-201ENST00000516237 95 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 RN7SKP40-201ENST00000517211 242 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.84□□□□□ -2.11
CPSF4O95639 OR6C7P-201ENST00000547875 934 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MTCYBP23-201ENST00000558717 1102 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4O95639 AC023813.2-201ENST00000564321 469 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.84□□□□□ -2.11
CPSF4O95639 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 MIR3609-201ENST00000582661 80 ntBASIC1.84□□□□□ -2.11
CPSF4O95639 AL158211.4-201ENST00000606988 584 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms