Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 AC007656.2-201ENST00000624902 4547 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.26□□□□□ -1.89
ZIC3O60481 MTND5P17-201ENST00000418405 1603 ntBASIC3.26□□□□□ -1.89
ZIC3O60481 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZIC3O60481 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.25□□□□□ -1.89
ZIC3O60481 RNU5A-1-201ENST00000362698 116 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 Y_RNA.89-201ENST00000363031 102 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 Y_RNA.573-201ENST00000384763 105 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 MIR23B-201ENST00000384832 97 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 USP9YP6-201ENST00000413550 854 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZIC3O60481 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.25□□□□□ -1.89
ZIC3O60481 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 RPL9P32-201ENST00000464118 620 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 NDUFB4P9-201ENST00000511646 388 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 RN7SKP83-201ENST00000516512 178 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 MIR2114-201ENST00000516645 80 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 RNA5SP143-201ENST00000516936 115 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 RN7SKP258-201ENST00000517151 304 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 NRON-201ENST00000517270 370 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 AC103843.2-201ENST00000530523 682 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 OR5B19P-201ENST00000531766 928 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.25□□□□□ -1.89
ZIC3O60481 AC068135.2-201ENST00000569293 1028 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 MIR3690-201ENST00000580266 75 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.25□□□□□ -1.89
ZIC3O60481 KLKP1-201ENST00000595979 403 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 BDH2P1-201ENST00000602288 736 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 AL162413.1-201ENST00000603198 110 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.25□□□□□ -1.89
ZIC3O60481 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.25□□□□□ -1.89
ZIC3O60481 FER-210ENST00000628534 558 ntTSL 5 BASIC3.25□□□□□ -1.89
ZIC3O60481 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ZIC3O60481 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 AC004520.1-201ENST00000608362 1413 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 AC006504.1-201ENST00000562493 3666 ntBASIC3.25□□□□□ -1.89
ZIC3O60481 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
ZIC3O60481 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZIC3O60481 AC116096.1-201ENST00000566804 2314 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 SNORA71.3-201ENST00000362582 128 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 Y_RNA.38-201ENST00000362617 102 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RNA5SP119-201ENST00000362715 117 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RNA5SP42-201ENST00000364278 115 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 Y_RNA.295-201ENST00000364918 102 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ZIC3O60481 SNORA69-201ENST00000383895 132 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 SNORA24.1-201ENST00000384401 135 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 MIR670-201ENST00000390142 98 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RNA5SP171-201ENST00000391071 115 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AL591416.1-201ENST00000404015 867 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RN7SKP140-201ENST00000411196 284 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.24□□□□□ -1.89
ZIC3O60481 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 MTCO2P3-201ENST00000442543 421 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
ZIC3O60481 NFU1P2-201ENST00000448700 469 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.24□□□□□ -1.89
ZIC3O60481 CACYBPP2-201ENST00000453625 678 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.24□□□□□ -1.89
ZIC3O60481 RNU7-63P-201ENST00000459054 62 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RNU6-261P-201ENST00000459506 102 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC006512.1-201ENST00000468816 291 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RPS29P25-201ENST00000481709 171 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC233702.1-201ENST00000482905 502 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC069439.1-201ENST00000494739 167 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC116353.2-201ENST00000505332 712 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.24□□□□□ -1.89
ZIC3O60481 AC105417.1-201ENST00000514691 285 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 SNORA31.3-201ENST00000516029 96 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 SNORA70.18-201ENST00000516696 98 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
ZIC3O60481 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.24□□□□□ -1.89
ZIC3O60481 OR5B10P-201ENST00000532869 642 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms