Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.15□□□□□ -1.75
PRPF3O43395 RPL31P60-201ENST00000478450 367 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF3O43395 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF3O43395 AC105417.1-201ENST00000514691 285 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF3O43395 TRMT10BP1-201ENST00000519377 943 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.15□□□□□ -1.75
PRPF3O43395 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF3O43395 AC004024.1-201ENST00000549244 247 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 SYF2P1-201ENST00000550658 413 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 HMGB1P14-201ENST00000557424 591 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AC027807.1-201ENST00000559921 996 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.15□□□□□ -1.75
PRPF3O43395 AC067852.3-201ENST00000589177 561 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AP001330.5-201ENST00000607176 411 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AF250324.2-201ENST00000608299 610 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 AL390240.1-201ENST00000612950 384 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF3O43395 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.15□□□□□ -1.75
PRPF3O43395 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF3O43395 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
PRPF3O43395 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRPF3O43395 AC103710.2-202ENST00000641454 2853 ntBASIC4.15□□□□□ -1.75
PRPF3O43395 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.75
PRPF3O43395 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PRPF3O43395 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC073073.2-201ENST00000609827 2578 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF3O43395 RNU6-1085P-201ENST00000363576 107 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PRPF3O43395 RNU6-701P-201ENST00000384059 107 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 MIR554-201ENST00000384874 96 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 MIR493-201ENST00000385254 89 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRPF3O43395 RPS4XP8-201ENST00000402039 771 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AP000567.1-201ENST00000406413 156 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 RNU2-33P-201ENST00000410344 192 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 OR51A5P-201ENST00000415429 942 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF3O43395 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.14□□□□□ -1.75
PRPF3O43395 AL451062.2-201ENST00000427515 271 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC018644.1-201ENST00000429934 551 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.14□□□□□ -1.75
PRPF3O43395 SNORD105B-201ENST00000458770 79 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 SNORA84-201ENST00000459229 133 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 RNU6-1220P-201ENST00000517126 108 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC023632.4-201ENST00000517783 191 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AP006245.1-201ENST00000522549 120 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.14□□□□□ -1.75
PRPF3O43395 TPRKBP2-201ENST00000565969 475 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC010591.1-201ENST00000603941 649 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AC126118.1-201ENST00000607744 628 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 U6atac.1-201ENST00000616025 117 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 AL589994.2-201ENST00000621124 579 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.14□□□□□ -1.75
PRPF3O43395 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.14□□□□□ -1.75
PRPF3O43395 AC007785.2-201ENST00000598627 1916 ntBASIC4.14□□□□□ -1.75
PRPF3O43395 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRPF3O43395 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF3O43395 Y_RNA.9-201ENST00000362354 101 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 RNU6-946P-201ENST00000383878 107 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 RPL17P50-201ENST00000396131 546 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF3O43395 YPEL5P1-201ENST00000419731 367 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 EIF1P1-201ENST00000421436 341 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF3O43395 MTATP6P30-201ENST00000443540 664 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF3O43395 ANP32BP2-201ENST00000454525 545 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 RPS3AP14-201ENST00000483907 780 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AC106707.2-201ENST00000484182 374 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF3O43395 AL117351.2-201ENST00000513571 157 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF3O43395 RN7SKP18-201ENST00000516005 275 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 RN7SKP60-201ENST00000516985 239 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 RNU6-1231P-201ENST00000517185 103 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.13□□□□□ -1.75
PRPF3O43395 AP001646.1-201ENST00000527936 915 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 TRAV28-201ENST00000557548 323 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.13□□□□□ -1.75
PRPF3O43395 AC009570.1-201ENST00000609599 745 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 AL359547.2-201ENST00000615810 418 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 AL359693.1-201ENST00000614959 2407 ntBASIC4.13□□□□□ -1.75
PRPF3O43395 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF3O43395 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF3O43395 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF3O43395 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms