Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU6-413P-201ENST00000384115 107 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 Y_RNA.472-201ENST00000384322 102 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 SNORD116-12-201ENST00000384468 92 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL360182.1-201ENST00000397433 468 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL590084.2-201ENST00000401481 382 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL162578.1-201ENST00000406202 378 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL513331.1-201ENST00000411908 397 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.38□□□□□ -2.03
CLOCKO15516 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.38□□□□□ -2.03
CLOCKO15516 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.38□□□□□ -2.03
CLOCKO15516 AL139413.1-201ENST00000421309 217 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.38□□□□□ -2.03
CLOCKO15516 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.38□□□□□ -2.03
CLOCKO15516 AL445687.1-201ENST00000439946 251 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.38□□□□□ -2.03
CLOCKO15516 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.38□□□□□ -2.03
CLOCKO15516 DPPA3P1-201ENST00000448050 469 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 ZNF886P-201ENST00000450781 723 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.38□□□□□ -2.03
CLOCKO15516 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.38□□□□□ -2.03
CLOCKO15516 AC114781.4-201ENST00000513707 639 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 ATP5F1P5-201ENST00000526403 760 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLOCKO15516 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.38□□□□□ -2.03
CLOCKO15516 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.38□□□□□ -2.03
CLOCKO15516 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.38□□□□□ -2.03
CLOCKO15516 AC002545.1-201ENST00000592511 181 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC136601.2-201ENST00000604356 474 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AL139344.1-201ENST00000605228 195 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC008498.1-201ENST00000613012 531 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC010133.1-201ENST00000615809 842 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 AC092608.2-201ENST00000624427 218 ntBASIC2.38□□□□□ -2.03
CLOCKO15516 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.38□□□□□ -2.03
CLOCKO15516 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLOCKO15516 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLOCKO15516 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLOCKO15516 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLOCKO15516 DDX43P2-201ENST00000604753 1354 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AL139276.1-201ENST00000311910 1001 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 RNU6-621P-201ENST00000364752 109 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 Y_RNA.311-201ENST00000365068 96 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 MIR34A-201ENST00000385130 110 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 TXNP7-201ENST00000406296 293 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 MIR1284-201ENST00000408337 120 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 USP9YP27-201ENST00000418455 438 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AL451054.2-201ENST00000420896 202 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLOCKO15516 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.37□□□□□ -2.03
CLOCKO15516 ZYG11AP1-201ENST00000430329 837 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 RPL35AP22-201ENST00000436855 335 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 UBE2V1P13-201ENST00000436983 439 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 COX7BP2-201ENST00000437976 242 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 OR10R1P-201ENST00000441524 1141 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLOCKO15516 AC007327.1-201ENST00000447461 264 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.37□□□□□ -2.03
CLOCKO15516 AC107626.1-201ENST00000471084 183 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 RPL36AP51-201ENST00000487216 318 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC010486.1-201ENST00000511793 424 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC024589.1-201ENST00000512207 263 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.37□□□□□ -2.03
CLOCKO15516 AC091163.3-201ENST00000518269 1144 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.37□□□□□ -2.03
CLOCKO15516 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.37□□□□□ -2.03
CLOCKO15516 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 MIR3117-201ENST00000584034 78 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AL645944.1-201ENST00000603857 493 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 TUG1_2.1-201ENST00000614234 87 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.37□□□□□ -2.03
CLOCKO15516 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 AC013437.2-201ENST00000639587 677 ntBASIC2.37□□□□□ -2.03
CLOCKO15516 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.37□□□□□ -2.03
CLOCKO15516 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLOCKO15516 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLOCKO15516 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.36□□□□□ -2.03
CLOCKO15516 RNU6-223P-201ENST00000362830 107 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 RN7SKP226-201ENST00000364912 300 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 RNU6-744P-201ENST00000365557 107 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 RNU6-1316P-201ENST00000384242 108 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 MIR9-1-201ENST00000385198 89 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 TAS2R15P-201ENST00000390674 928 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 MIR888-201ENST00000401186 77 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 AF274854.1-201ENST00000413236 615 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.36□□□□□ -2.03
CLOCKO15516 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.36□□□□□ -2.03
CLOCKO15516 SNRPEP7-201ENST00000438350 220 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.36□□□□□ -2.03
CLOCKO15516 AL358794.1-201ENST00000445689 381 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 AP000936.2-201ENST00000447151 681 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 AC104982.1-201ENST00000478775 574 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 HMGB1P36-201ENST00000487709 576 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.36□□□□□ -2.03
CLOCKO15516 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.36□□□□□ -2.03
CLOCKO15516 AC087241.2-201ENST00000535801 324 ntBASIC2.36□□□□□ -2.03
CLOCKO15516 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.36□□□□□ -2.03
CLOCKO15516 ISCA1P3-201ENST00000577104 373 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms