Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.86□□□□□ -2.11
UBFD1O14562 AC122134.1-202ENST00000569111 1201 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 MIR4658-201ENST00000584344 65 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 OR1M4P-201ENST00000589199 287 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.86□□□□□ -2.11
UBFD1O14562 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 AL356280.1-201ENST00000603614 379 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL031176.1-201ENST00000604554 466 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.86□□□□□ -2.11
UBFD1O14562 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
UBFD1O14562 AC098657.3-201ENST00000620434 263 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.86□□□□□ -2.11
UBFD1O14562 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.86□□□□□ -2.11
UBFD1O14562 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBFD1O14562 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UBFD1O14562 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
UBFD1O14562 CENPCP1-201ENST00000533085 2578 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
UBFD1O14562 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBFD1O14562 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 RNU2-43P-201ENST00000410306 190 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 RNU6-193P-201ENST00000410977 107 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 BEND7P1-201ENST00000422058 457 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC234781.2-201ENST00000426370 994 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AL512637.2-201ENST00000431287 1256 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC090774.1-201ENST00000435925 246 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 THAP5P1-201ENST00000439089 262 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AL592447.1-201ENST00000447592 540 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC008379.1-201ENST00000463655 464 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC078857.1-201ENST00000469870 667 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC117522.2-201ENST00000510049 657 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.85□□□□□ -2.11
UBFD1O14562 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC023632.1-201ENST00000518463 375 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.85□□□□□ -2.11
UBFD1O14562 AC044913.1-201ENST00000557200 430 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AL138976.2-201ENST00000563989 694 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC124283.4-201ENST00000581815 456 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC005776.1-201ENST00000603164 290 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 AC013553.2-201ENST00000604244 589 ntBASIC1.85□□□□□ -2.11
UBFD1O14562 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
UBFD1O14562 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UBFD1O14562 MTND5P29-201ENST00000458676 1807 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 MTCO1P4-201ENST00000520516 1409 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 RNU6-1066P-201ENST00000363573 105 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 RNU6-354P-201ENST00000383862 107 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 RNU6-610P-201ENST00000384264 107 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 Y_RNA.548-201ENST00000384656 105 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 U3.20-201ENST00000390909 217 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 RNA5SP354-201ENST00000391247 136 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 RPS3AP24-201ENST00000407896 734 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 EIF1AXP1-201ENST00000419267 435 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.84□□□□□ -2.11
UBFD1O14562 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.84□□□□□ -2.11
UBFD1O14562 UBE2FP3-201ENST00000436366 524 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 ARPC3P1-201ENST00000437218 533 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 MTND4P15-201ENST00000437913 1033 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
UBFD1O14562 AC009237.8-201ENST00000445492 379 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AL096829.2-201ENST00000446582 742 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
UBFD1O14562 MRPL42P4-201ENST00000453267 443 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AC092155.2-201ENST00000454675 477 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AC072039.1-201ENST00000477611 581 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 AL359273.1-201ENST00000510918 627 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 SNORA31.22-201ENST00000517204 135 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.84□□□□□ -2.11
UBFD1O14562 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.84□□□□□ -2.11
UBFD1O14562 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.84□□□□□ -2.11
UBFD1O14562 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.84□□□□□ -2.11
UBFD1O14562 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UBFD1O14562 UCA1.1-201ENST00000620952 75 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AC012640.5-201ENST00000623897 319 ntBASIC1.84□□□□□ -2.11
UBFD1O14562 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.84□□□□□ -2.11
UBFD1O14562 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.84□□□□□ -2.11
UBFD1O14562 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.12
UBFD1O14562 DBF4P1-201ENST00000412976 1892 ntBASIC1.84□□□□□ -2.12
UBFD1O14562 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
UBFD1O14562 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
UBFD1O14562 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.83□□□□□ -2.12
UBFD1O14562 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
UBFD1O14562 AL356292.1-201ENST00000283110 373 ntBASIC1.83□□□□□ -2.12
UBFD1O14562 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBFD1O14562 Y_RNA.338-201ENST00000365320 114 ntBASIC1.83□□□□□ -2.12
UBFD1O14562 SUGT1P1-201ENST00000379514 476 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms