Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.56□□□□□ -2.16
SDCBPO00560 AP003066.2-201ENST00000529375 555 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC118942.1-201ENST00000529674 1035 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.56□□□□□ -2.16
SDCBPO00560 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SDCBPO00560 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.56□□□□□ -2.16
SDCBPO00560 AL391261.3-201ENST00000557194 520 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.56□□□□□ -2.16
SDCBPO00560 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.56□□□□□ -2.16
SDCBPO00560 MIR4648-201ENST00000580107 72 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
SDCBPO00560 HMGN2P15-201ENST00000585707 270 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC012493.3-201ENST00000604494 112 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.56□□□□□ -2.16
SDCBPO00560 U2.15-201ENST00000611544 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.16-201ENST00000613119 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.12-201ENST00000613778 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.20-201ENST00000613956 192 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.9-201ENST00000615427 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC003001.2-201ENST00000616294 831 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.11-201ENST00000616345 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.2-201ENST00000616535 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.3-201ENST00000617785 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.19-201ENST00000618602 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 RNU2-1-201ENST00000618664 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.6-201ENST00000619225 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.5-201ENST00000619465 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 U2.10-201ENST00000620268 191 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.56□□□□□ -2.16
SDCBPO00560 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.56□□□□□ -2.16
SDCBPO00560 AL049641.1-201ENST00000441055 1948 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC080128.1-201ENST00000474389 1917 ntBASIC1.56□□□□□ -2.16
SDCBPO00560 AC092881.1-201ENST00000638218 2733 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SDCBPO00560 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SDCBPO00560 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SDCBPO00560 MIR16-2-201ENST00000362117 81 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 RNU5A-1-201ENST00000362698 116 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 RNA5SP88-201ENST00000365560 109 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 RNU6-76P-201ENST00000384060 104 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 MIR17-201ENST00000385012 84 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 MIR514A1-201ENST00000385133 98 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 RPS7P9-201ENST00000414704 586 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 LUZP4P1-201ENST00000415420 344 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 NPM1P11-201ENST00000417106 855 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 RSL24D1P8-201ENST00000434442 492 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.55□□□□□ -2.16
SDCBPO00560 AC022447.3-201ENST00000506865 495 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 AC022483.1-201ENST00000514020 567 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 HMGB1P1-201ENST00000522557 636 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SDCBPO00560 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.55□□□□□ -2.16
SDCBPO00560 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.55□□□□□ -2.16
SDCBPO00560 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 MIR4666A-201ENST00000580160 79 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 AC135507.1-201ENST00000607214 561 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 TUG1_1.1-201ENST00000610654 145 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 AC087241.4-201ENST00000612441 480 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 AC025594.3-201ENST00000613068 790 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 MIR6130-201ENST00000619419 109 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 AC068057.2-201ENST00000624047 895 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SDCBPO00560 CCT4P2-201ENST00000233836 1548 ntBASIC1.55□□□□□ -2.16
SDCBPO00560 MTND5P29-201ENST00000458676 1807 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SDCBPO00560 ZNF355P-201ENST00000427301 3216 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SDCBPO00560 AL356131.1-201ENST00000405826 414 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AL592310.1-201ENST00000414330 671 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 SEPT2P1-201ENST00000419651 180 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AL109913.1-201ENST00000421173 514 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.54□□□□□ -2.16
SDCBPO00560 MTND2P5-201ENST00000432656 1006 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 BNIP3P2-201ENST00000441221 577 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 MTATP6P7-201ENST00000453315 681 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.54□□□□□ -2.16
SDCBPO00560 KLF3P2-201ENST00000465138 268 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.54□□□□□ -2.16
SDCBPO00560 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.54□□□□□ -2.16
SDCBPO00560 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.54□□□□□ -2.16
SDCBPO00560 AC093281.2-201ENST00000510153 597 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SDCBPO00560 RN7SKP31-201ENST00000516354 278 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 RNU2-44P-201ENST00000516795 194 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.54□□□□□ -2.16
SDCBPO00560 AP002748.2-201ENST00000528671 348 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
SDCBPO00560 AC006518.2-201ENST00000542513 940 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.54□□□□□ -2.16
SDCBPO00560 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.54□□□□□ -2.16
SDCBPO00560 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.54□□□□□ -2.16
SDCBPO00560 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.54□□□□□ -2.16
SDCBPO00560 AC068790.3-201ENST00000602988 553 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 RPAP2P1-201ENST00000603626 1168 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 DUXAP11-201ENST00000603858 526 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AL162373.1-201ENST00000620433 407 ntBASIC1.54□□□□□ -2.16
SDCBPO00560 AC004009.2-201ENST00000623016 728 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms