Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ELOCP7-201ENST00000439968 331 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 MTND4P25-201ENST00000441039 533 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN3O00409 FGF7P6-202ENST00000451282 293 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN3O00409 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN3O00409 AC013267.1-201ENST00000458227 267 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AL133162.1-201ENST00000463228 453 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 AC116562.3-201ENST00000506136 177 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 PRDX4P1-201ENST00000507189 574 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 RANP9-201ENST00000519957 271 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC007991.1-201ENST00000522680 631 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 AP006587.4-201ENST00000526053 529 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC068587.5-201ENST00000528506 175 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 OR5AL2P-201ENST00000532185 920 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 HSPE1P5-201ENST00000561489 272 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AP000907.4-201ENST00000604143 237 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC007363.1-201ENST00000604736 620 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AC005344.1-201ENST00000613391 459 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 AL359314.1-201ENST00000616913 261 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 AC010733.2-201ENST00000589496 5702 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
FOXN3O00409 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 MFSD8-236ENST00000641509 4050 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
FOXN3O00409 AL136164.4-201ENST00000625013 2135 ntBASIC3.94□□□□□ -1.78
FOXN3O00409 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
FOXN3O00409 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN3O00409 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 ZNF680P1-201ENST00000436625 1469 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 AC007656.2-201ENST00000624902 4547 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN3O00409 RNU6-1090P-201ENST00000364065 94 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 RNU6-74P-201ENST00000384235 107 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 MIR1290-201ENST00000408735 78 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 RN7SKP156-201ENST00000410308 342 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC091390.3-201ENST00000426478 338 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 AL356867.1-201ENST00000429623 299 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC092573.2-201ENST00000434546 243 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 RPL7P54-201ENST00000438336 674 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN3O00409 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXN3O00409 VN1R34P-201ENST00000447387 883 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 RPS29P15-201ENST00000458329 171 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 RPL31P58-201ENST00000469001 379 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC098799.2-201ENST00000509466 868 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXN3O00409 RN7SKP13-201ENST00000515933 244 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXN3O00409 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN3O00409 AL121579.1-201ENST00000555129 305 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AL512360.1-201ENST00000555346 234 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 NCAPGP2-201ENST00000557911 754 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN3O00409 MIR5685-201ENST00000579080 79 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXN3O00409 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN3O00409 AC017083.3-201ENST00000609955 700 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN3O00409 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN3O00409 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
FOXN3O00409 U6.114-201ENST00000636407 96 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 MIR3688-2-201ENST00000636963 87 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXN3O00409 SDAD1P2-201ENST00000441308 2028 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC073544.1-201ENST00000600110 1595 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 AC005183.1-201ENST00000603687 1979 ntBASIC3.93□□□□□ -1.78
FOXN3O00409 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 RNU6-1120P-201ENST00000362988 108 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 RNU6-179P-201ENST00000363350 107 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 RNU6-960P-201ENST00000364056 120 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 RNA5SP42-201ENST00000364278 115 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 U8.11-201ENST00000384699 133 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 U8.12-201ENST00000384701 133 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXN3O00409 RPL32P23-201ENST00000397237 405 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AL513331.1-201ENST00000411908 397 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN3O00409 USP9YP6-201ENST00000413550 854 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AL109913.1-201ENST00000421173 514 ntBASIC3.92□□□□□ -1.78
FOXN3O00409 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN3O00409 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN3O00409 HMGB1P31-201ENST00000437242 427 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms