Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-798P-201ENST00000516912 103 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AL391156.1-201ENST00000554965 554 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC055876.1-202ENST00000567053 138 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR3162-201ENST00000581818 82 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC005858.4-201ENST00000623191 700 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC112204.3-201ENST00000623822 332 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 AC019226.1-201ENST00000625666 515 ntBASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NEDD8-MDP1E9PL57 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 FTLP6-201ENST00000355274 422 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 RNY4P24-201ENST00000362735 96 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 MTCYBP36-201ENST00000404146 440 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AL591034.1-201ENST00000407447 340 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC233728.2-201ENST00000425348 757 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 UBE2D3P4-201ENST00000441973 436 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AL109933.2-201ENST00000452651 260 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 RPS27AP8-201ENST00000452665 445 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL21P41-201ENST00000459863 264 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 RN7SL75P-201ENST00000461926 281 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 HSPE1P6-201ENST00000479457 291 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC116347.2-201ENST00000514912 523 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC010653.1-201ENST00000571108 881 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092354.1-201ENST00000606057 376 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AL391813.2-201ENST00000609113 322 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093838.1-201ENST00000613014 469 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC093591.3-201ENST00000634516 308 ntBASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.87□□□□□ -1.95
NEDD8-MDP1E9PL57 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU1-35P-201ENST00000362782 153 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU4-21P-201ENST00000362802 126 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU1-112P-201ENST00000364401 164 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNY3P9-201ENST00000384727 106 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC009518.2-201ENST00000418056 731 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC019097.1-201ENST00000424783 735 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 ARL5AP4-201ENST00000430731 512 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AL049734.2-201ENST00000441066 616 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC118469.1-201ENST00000442943 488 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 BMI1P1-201ENST00000445879 941 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL36AP33-201ENST00000450395 310 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RN7SL432P-201ENST00000484057 298 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-201P-201ENST00000517100 61 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 MTCO1P47-201ENST00000523889 1271 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 HPRT1P3-201ENST00000539521 576 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AL133153.1-201ENST00000557756 303 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AP005205.1-201ENST00000563503 508 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR5697-201ENST00000578045 78 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC008088.1-201ENST00000580993 280 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 Z99497.2-201ENST00000603634 310 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC121247.2-201ENST00000604776 136 ntBASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 AC027807.2-201ENST00000616099 408 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms