Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP000770.2-201ENST00000623694 100 ntBASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 AC068880.5-201ENST00000624331 290 ntBASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 AC091965.5-201ENST00000624785 342 ntBASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 AC110079.1-202ENST00000635213 138 ntBASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
NPIPA2E9PIF3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 MIR148B-201ENST00000362252 99 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 MIR19A-201ENST00000384878 82 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 TAS2R15P-201ENST00000390674 928 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 U8.14-201ENST00000390843 143 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 BX682237.1-201ENST00000415016 335 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC236972.1-201ENST00000433225 199 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL714022.1-201ENST00000439897 151 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 Z82210.1-201ENST00000440037 231 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 BNIP3P2-201ENST00000441221 577 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RPL23AP20-201ENST00000447965 421 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 UQCRHP3-201ENST00000451503 251 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RNU7-125P-201ENST00000458760 62 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 MTND4LP3-201ENST00000468320 276 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC116337.2-201ENST00000477662 156 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC068587.2-201ENST00000478386 781 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 LARP1BP2-201ENST00000486594 519 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC055855.1-201ENST00000489563 579 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RNU6-1129P-201ENST00000515964 104 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 RNA5SP291-201ENST00000517222 105 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL133153.1-201ENST00000557756 303 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AP001004.1-201ENST00000582468 324 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC068790.3-201ENST00000602988 553 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC026790.2-201ENST00000606282 430 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AC007998.5-201ENST00000622938 237 ntBASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.72□□□□□ -1.97
NPIPA2E9PIF3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
NPIPA2E9PIF3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 SNORA46-201ENST00000384762 135 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC078974.1-201ENST00000411597 223 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC092047.1-201ENST00000424997 240 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC007919.1-201ENST00000429380 217 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 LARP1BP3-201ENST00000437229 869 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 PIGFP3-201ENST00000441918 722 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 RNU7-23P-201ENST00000459465 62 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 UBE2DNL-203ENST00000474922 222 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 NRON-201ENST00000517270 370 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC087373.1-201ENST00000524920 491 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AP000857.1-201ENST00000532151 543 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL161729.4-201ENST00000604650 476 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL136363.1-201ENST00000605349 337 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 Z99289.3-201ENST00000605586 594 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL627309.6-201ENST00000606857 840 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 AL355472.4-201ENST00000610233 626 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NPIPA2E9PIF3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms