Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 AL157700.1-201ENST00000561973 1432 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 CR382285.2-201ENST00000624662 1495 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 RNA5SP489-201ENST00000410986 109 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 CR848007.2-201ENST00000424918 787 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 IFNA20P-201ENST00000436840 528 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 Z96811.1-201ENST00000445880 108 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 MTCO2P9-201ENST00000503214 694 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 LDHBP3-201ENST00000514909 822 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 AC010928.2-201ENST00000588017 287 ntBASIC0.92□□□□□ -2.26
COL6A5A8TX70 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.92□□□□□ -2.26
COL6A5A8TX70 DEFB108F-201ENST00000344638 222 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 SNORA6-201ENST00000384033 151 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 PSMA2P3-201ENST00000429685 675 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC234064.1-201ENST00000436312 247 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AL360221.1-201ENST00000445989 335 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC022493.1-201ENST00000492984 337 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 MTRNR2L2-201ENST00000604882 87 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AL390240.1-201ENST00000612950 384 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC009318.3-201ENST00000616916 503 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL6A5A8TX70 RNA5SP465-201ENST00000391195 109 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 RPL23AP47-201ENST00000408017 460 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 MTND4LP13-201ENST00000425022 298 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 MRPL42P6-201ENST00000486397 371 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC096571.1-202ENST00000506634 735 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC103833.1-201ENST00000517442 172 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 MTCO1P47-201ENST00000523889 1271 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.91□□□□□ -2.26
COL6A5A8TX70 DUXAP4-201ENST00000603046 613 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC006338.1-201ENST00000618453 749 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 uc_338.20-201ENST00000621563 178 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC090517.3-201ENST00000625170 141 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC090740.1-201ENST00000623193 2262 ntBASIC0.91□□□□□ -2.26
COL6A5A8TX70 AC007098.1-201ENST00000420122 367 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.9□□□□□ -2.26
COL6A5A8TX70 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A5A8TX70 AC090096.1-201ENST00000489168 390 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.9□□□□□ -2.26
COL6A5A8TX70 SNORA48.9-201ENST00000516419 162 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 AL138976.2-201ENST00000563989 694 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.9□□□□□ -2.26
COL6A5A8TX70 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.9□□□□□ -2.26
COL6A5A8TX70 AC123786.2-201ENST00000603459 275 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 DUXAP9-208ENST00000622815 614 ntBASIC0.9□□□□□ -2.26
COL6A5A8TX70 AC138915.1-201ENST00000565427 1685 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 RNU1-148P-201ENST00000384472 162 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 MIR329-1-201ENST00000385028 80 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A5A8TX70 RFESDP1-201ENST00000422350 461 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 MED14P1-201ENST00000430517 648 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A5A8TX70 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.9□□□□□ -2.27
COL6A5A8TX70 AC090821.2-201ENST00000523552 176 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 U73023.1-201ENST00000603134 700 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.9□□□□□ -2.27
COL6A5A8TX70 AC245884.12-201ENST00000615364 59 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 MTND5P10-201ENST00000603719 1809 ntBASIC0.9□□□□□ -2.27
COL6A5A8TX70 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 RNU6-1126P-201ENST00000384002 107 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 MIR329-2-201ENST00000385029 84 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 HMGB1P9-201ENST00000429856 646 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC093281.2-201ENST00000510153 597 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AF279873.1-201ENST00000523393 313 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC138473.1-201ENST00000605717 526 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC090425.2-201ENST00000608818 501 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COL6A5A8TX70 RNU11-5P-201ENST00000391216 129 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 Y_RNA.610-201ENST00000410681 103 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 SNRPGP13-201ENST00000442212 177 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC121161.1-201ENST00000510606 652 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC068620.3-201ENST00000602749 560 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC006001.4-201ENST00000622243 395 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 AC011477.1-204ENST00000623416 1325 ntBASIC0.89□□□□□ -2.27
COL6A5A8TX70 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 RNY4P24-201ENST00000362735 96 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms