Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 BX119904.4-201ENST00000424402 301 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 RPL26P6-201ENST00000440913 438 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 GDI2P2-201ENST00000445131 608 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC002381.1-201ENST00000447049 280 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 ARPC3P5-201ENST00000448802 534 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 snoU13.8-201ENST00000458890 104 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 RPL23AP11-201ENST00000475260 469 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC011825.1-201ENST00000484967 388 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 FAM172BP-201ENST00000487497 1089 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 RNU6-678P-201ENST00000516832 109 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC007954.1-201ENST00000554198 494 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 EIF4BP1-201ENST00000554881 351 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 HMGB1P14-201ENST00000557424 591 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL451007.1-201ENST00000595491 289 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL390208.1-201ENST00000605885 644 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL590099.1-201ENST00000615276 138 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49BA6NDI0 MIR6130-201ENST00000619419 109 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM49BA6NDI0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49BA6NDI0 AL079343.1-201ENST00000572358 1771 ntBASIC3□□□□□ -1.93
TRIM49BA6NDI0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 RNU5F-6P-201ENST00000362979 116 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 CYCSP46-201ENST00000423569 204 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC244035.1-201ENST00000430042 390 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC129850.1-201ENST00000436203 508 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 RSU1P2-202ENST00000437884 485 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 RPL31P50-201ENST00000471002 296 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC091965.2-201ENST00000512324 613 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC026801.2-201ENST00000515352 425 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC106038.2-201ENST00000520706 568 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 CASP1P1-201ENST00000526345 212 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 DUXAP4-201ENST00000603046 613 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AL590229.1-201ENST00000603497 542 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC097468.3-201ENST00000607956 456 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AL161629.2-201ENST00000615347 275 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AL450472.3-201ENST00000615578 367 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 AC099654.7-201ENST00000635788 2127 ntBASIC2.99□□□□□ -1.93
TRIM49BA6NDI0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 RNU6-76P-201ENST00000384060 104 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 RN7SKP142-201ENST00000411236 328 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 TPMTP2-201ENST00000414372 726 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 SEPT2P1-201ENST00000419651 180 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AL031667.1-201ENST00000440222 725 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 MTCO1P19-201ENST00000443487 500 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 MTCO1P27-201ENST00000448269 226 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 CACYBPP2-201ENST00000453625 678 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC010099.1-201ENST00000455434 375 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 TPTE2P5-203ENST00000458118 728 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 RPS3AP14-201ENST00000483907 780 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 MTND1P22-201ENST00000510572 951 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC017037.2-201ENST00000513850 890 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 RNU6-798P-201ENST00000516912 103 ntBASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.98□□□□□ -1.93
TRIM49BA6NDI0 AC136618.2-201ENST00000575091 400 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms