Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU2-43P-201ENST00000410306 190 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL445646.1-201ENST00000431784 216 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 RSU1P2-202ENST00000437884 485 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 Z82210.1-201ENST00000440037 231 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC079448.1-201ENST00000449377 373 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC099513.1-201ENST00000490423 301 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AP000926.3-201ENST00000497201 299 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP445-201ENST00000515889 115 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 COX6CP8-201ENST00000522620 226 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AP004247.1-201ENST00000531556 1289 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC022080.3-201ENST00000544433 482 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 LSM6P2-201ENST00000552208 177 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL391813.1-201ENST00000603098 260 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.6-201ENST00000603753 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.11-201ENST00000604059 253 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.10-201ENST00000604330 253 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AC008162.1-201ENST00000604718 254 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.1-201ENST00000604752 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.2-201ENST00000604983 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.5-201ENST00000605253 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.4-201ENST00000605279 254 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.12-201ENST00000605291 253 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.8-201ENST00000605353 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.9-201ENST00000605428 253 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL670379.7-201ENST00000605823 252 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 AL050343.2-201ENST00000607338 280 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 CTSLP2-204ENST00000629029 392 ntBASIC0.73□□□□□ -2.29
LINC01558Q9Y6Z2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP374-201ENST00000362939 125 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNU6-486P-201ENST00000363116 107 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP267-201ENST00000364893 126 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 SNRPEP2-201ENST00000397592 279 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 MIR1285-1-201ENST00000408593 84 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC008173.1-201ENST00000418901 264 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNF19BPX-201ENST00000426224 625 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RPS29P28-201ENST00000446439 141 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 OR2A41P-201ENST00000473586 105 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RPS27P23-201ENST00000487608 251 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC139453.3-201ENST00000493276 369 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP112-201ENST00000515937 99 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RNA5SP148-201ENST00000516527 94 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC026464.5-201ENST00000562497 722 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC068338.1-201ENST00000565567 176 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC007151.1-201ENST00000572774 483 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 RN7SL753P-201ENST00000581238 290 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 SUMO2P14-201ENST00000604488 293 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AL161729.4-201ENST00000604650 476 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC016542.1-201ENST00000608259 493 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC009974.1-201ENST00000608881 455 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC103710.2-201ENST00000609912 942 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 AC092608.3-201ENST00000625017 386 ntBASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
LINC01558Q9Y6Z2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 CBX3P1-201ENST00000325243 554 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 Y_RNA.67-201ENST00000362870 100 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 RNU6-251P-201ENST00000363235 104 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SNORA38.1-201ENST00000364172 131 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SNORA22-201ENST00000383907 134 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SNORA22C-201ENST00000384614 134 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 MIR135A2-201ENST00000384854 100 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC009310.1-201ENST00000414414 451 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms