Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MTND4P24-201ENST00000424002 397 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC024082.2-201ENST00000434771 238 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC068781.1-201ENST00000488231 618 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC124293.1-201ENST00000530034 493 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AL109809.4-201ENST00000603520 2185 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 RNU6-251P-201ENST00000363235 104 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AL121978.1-201ENST00000402778 359 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA31.11-201ENST00000516528 139 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 ARL2BPP2-201ENST00000550907 489 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC025918.2-201ENST00000558683 763 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 MIR3609-201ENST00000582661 80 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC012669.1-201ENST00000603209 283 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC012360.2-201ENST00000609349 391 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC006329.2-201ENST00000611491 394 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC079395.3-201ENST00000615161 484 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC073968.1-201ENST00000618594 637 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 AC027514.1-201ENST00000588561 1603 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 NUP58P1-201ENST00000502546 1738 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 ZNF876P-202ENST00000398732 1485 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 CCT4P2-201ENST00000233836 1548 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 MIR337-201ENST00000362281 93 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA67.1-201ENST00000364749 141 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC055855.1-201ENST00000489563 579 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 CBX3P3-201ENST00000508108 532 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AC007375.1-201ENST00000554513 578 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 BPTFP1-201ENST00000579209 492 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 MIR5694-201ENST00000581190 76 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 MIR3117-201ENST00000584034 78 ntBASIC1.84□□□□□ -2.11
SCN10AQ9Y5Y9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 RPL7L1P10-201ENST00000427790 463 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 RPL31P60-201ENST00000478450 367 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC090255.1-201ENST00000495779 349 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC109471.1-201ENST00000511631 612 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 RNU5F-8P-201ENST00000515941 111 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC022634.1-201ENST00000520765 532 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC067805.1-201ENST00000559344 470 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 MYL12BP1-201ENST00000569826 507 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC104307.1-201ENST00000616142 196 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 FRG1HP-204ENST00000617940 757 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AL356585.4-201ENST00000623078 1229 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AL513475.1-201ENST00000406602 315 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 RNU2-68P-201ENST00000410878 191 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AL512637.2-201ENST00000431287 1256 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 ARF4P4-201ENST00000439608 520 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 USP9YP10-201ENST00000454868 628 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC114322.1-201ENST00000506771 926 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AL049838.1-201ENST00000563647 981 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 MIR5571-201ENST00000577998 113 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 ZNF663P-202ENST00000641770 1131 ntBASIC1.83□□□□□ -2.12
SCN10AQ9Y5Y9 MTND4P1-201ENST00000457501 1466 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 RNU4-13P-201ENST00000364019 141 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 MCTS2P-201ENST00000394552 546 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 PAICSP7-201ENST00000419829 962 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 AC012497.1-201ENST00000429392 575 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 WARS2P1-201ENST00000429678 537 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 RPS15AP27-201ENST00000449183 343 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 CABYRP1-201ENST00000465493 1045 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 AC008427.1-201ENST00000503102 655 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 AC104108.1-201ENST00000509930 412 ntBASIC1.82□□□□□ -2.12
SCN10AQ9Y5Y9 RNU6-798P-201ENST00000516912 103 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms