Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 MIR5571-201ENST00000577998 113 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 MIR5092-201ENST00000583139 88 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AP000403.1-201ENST00000603349 851 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AC124016.2-201ENST00000610058 665 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL589743.7-201ENST00000612637 233 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 MTND5P30-201ENST00000452896 1731 ntBASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RHBDD3Q9Y3P4 AL139276.1-201ENST00000311910 1001 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 SNORD62.1-201ENST00000362541 86 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 snoZ40.1-201ENST00000364540 72 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-343P-201ENST00000364709 104 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-7-201ENST00000364784 107 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-8-201ENST00000365467 107 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RPL23AP29-201ENST00000397284 453 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RNU4-72P-201ENST00000410754 173 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC096664.2-201ENST00000411843 406 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC068533.2-201ENST00000411872 306 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RPL17P12-201ENST00000413391 526 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 TIMM9P2-201ENST00000419324 266 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 PTP4A1P7-201ENST00000423476 514 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RPL23AP83-201ENST00000434984 473 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 CR769767.1-201ENST00000436337 346 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 RPS12P2-201ENST00000439728 269 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC080013.2-201ENST00000460866 323 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC096725.1-201ENST00000514266 313 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 SNORD19.2-201ENST00000516978 73 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 SCARNA3-201ENST00000517097 143 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AP005902.1-201ENST00000521358 186 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC243972.3-201ENST00000539655 198 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC074050.1-201ENST00000563247 211 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 MTND4LP25-201ENST00000570218 163 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AL391813.1-201ENST00000603098 260 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC025588.2-201ENST00000604851 466 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AL139344.1-201ENST00000605228 195 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC231657.1-201ENST00000624313 397 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC080100.1-201ENST00000624239 5356 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 AC092447.10-201ENST00000620607 1652 ntBASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.21□□□□□ -2.06
RHBDD3Q9Y3P4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 RNU6-859P-201ENST00000362728 107 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 U8.8-201ENST00000365399 135 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 MIR483-201ENST00000385070 76 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 RNU2-52P-201ENST00000410680 190 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC236972.1-201ENST00000433225 199 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 SNRPEP9-201ENST00000436794 238 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 IPO7P1-201ENST00000442031 636 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AP000936.2-201ENST00000447151 681 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC092902.1-201ENST00000486999 259 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC010186.2-204ENST00000537668 439 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 EIF4BP1-201ENST00000554881 351 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 LARP7P3-201ENST00000579888 337 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AC126365.2-201ENST00000580630 379 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 VN1R92P-201ENST00000598511 928 ntBASIC2.2□□□□□ -2.06
RHBDD3Q9Y3P4 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms