Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 BBIP1P1-201ENST00000602999 279 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 RPP40P2-201ENST00000603596 712 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC068313.1-201ENST00000604028 1008 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC011451.2-201ENST00000604303 598 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AL049641.1-201ENST00000441055 1948 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 ZNF271P-202ENST00000465539 1970 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 GNG5P1-201ENST00000255500 204 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 RNU4-92P-201ENST00000363783 136 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 SNORA72.3-201ENST00000365074 132 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 SNORA36C-201ENST00000384289 132 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 MIR514A1-201ENST00000385133 98 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 SNORA48.2-201ENST00000390926 124 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 RPL23AP29-201ENST00000397284 453 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AL139039.1-201ENST00000401900 692 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 Z85995.1-201ENST00000415547 335 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 PPP1R11P2-201ENST00000423543 382 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AL590383.1-201ENST00000428602 75 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AL117351.1-201ENST00000438864 766 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 RNU7-23P-201ENST00000459465 62 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 RNU6-150P-201ENST00000516237 95 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 COX6CP5-201ENST00000527162 228 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC005832.2-201ENST00000538921 1430 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC121758.2-201ENST00000553271 193 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 CYCSP2-201ENST00000558168 301 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC068135.2-201ENST00000569293 1028 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 MIR3616-201ENST00000584070 92 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AP001429.1-201ENST00000602568 530 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC006270.3-201ENST00000605967 1036 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 AC107952.2-201ENST00000606048 486 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SMC3Q9UQE7 ZNF876P-202ENST00000398732 1485 ntBASIC2.89□□□□□ -1.95
SMC3Q9UQE7 MTCO1P9-201ENST00000505577 1534 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 OR5J1P-201ENST00000313544 939 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 Y_RNA.234-201ENST00000364409 97 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 RNU6-343P-201ENST00000364709 104 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 MIR325-201ENST00000385260 98 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC018630.2-202ENST00000422992 927 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AL953862.1-201ENST00000423016 168 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 COX7BP2-201ENST00000437976 242 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC233279.1-201ENST00000455300 423 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 RNU6-528P-201ENST00000516926 100 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 IGLV3-17-201ENST00000519099 244 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 OR6C7P-201ENST00000547875 934 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC245297.2-201ENST00000610119 565 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC104237.2-201ENST00000612456 443 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AC002550.2-201ENST00000621246 394 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AL137003.2-201ENST00000606924 2538 ntBASIC2.88□□□□□ -1.95
SMC3Q9UQE7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AL161781.1-201ENST00000354277 403 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 RNU6-83P-201ENST00000384568 112 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 SNORA41-201ENST00000384675 132 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 RNU6-443P-201ENST00000384780 107 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AL008987.1-201ENST00000415528 237 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AL512844.2-201ENST00000433990 593 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 CR769767.1-201ENST00000436337 346 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 MTND5P14-201ENST00000441481 1267 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 MTCYBP3-201ENST00000445588 1137 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 BMI1P1-201ENST00000445879 941 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AC002381.1-201ENST00000447049 280 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.87□□□□□ -1.95
SMC3Q9UQE7 MTND4LP3-201ENST00000468320 276 ntBASIC2.87□□□□□ -1.95
SMC3Q9UQE7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms