Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AL022578.1-201ENST00000439330 1433 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 AP000776.1-201ENST00000530032 1663 ntBASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.13□□□□□ -1.91
NPC1L1Q9UHC9 SNORD114-30-201ENST00000364448 72 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 SSXP9-201ENST00000417503 292 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 CR769767.1-201ENST00000436337 346 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 ARL4AP2-201ENST00000507378 601 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC093677.1-201ENST00000514414 678 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 RNU6-150P-201ENST00000516237 95 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 OR6C7P-201ENST00000547875 934 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 KC877982.1-201ENST00000602313 470 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC007938.3-201ENST00000604965 623 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC009974.1-201ENST00000608881 455 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MTND5P6-201ENST00000422338 1798 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 FAM133CP-201ENST00000332869 704 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 RNU6-952P-201ENST00000391164 108 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 BTF3P7-201ENST00000407097 488 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MIR1290-201ENST00000408735 78 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 RAP1BP1-201ENST00000412709 553 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL135786.1-201ENST00000415892 214 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 RPS25P9-201ENST00000435591 252 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 CR769776.1-201ENST00000441254 787 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MTND3P1-201ENST00000441336 220 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 RAC1P7-201ENST00000445367 377 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 PAXBP1P1-201ENST00000449315 447 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 SNORD11.1-201ENST00000459482 85 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 CBX3P3-201ENST00000508108 532 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC024589.1-201ENST00000512207 263 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MTND2P32-201ENST00000521584 1038 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL353997.4-201ENST00000586196 166 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC080013.3-201ENST00000606839 578 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC007349.4-201ENST00000608114 532 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC009570.1-201ENST00000609599 745 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 MIR6076-201ENST00000617521 113 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AC006386.1-201ENST00000619436 415 ntBASIC3.12□□□□□ -1.91
NPC1L1Q9UHC9 AL513185.3-201ENST00000433335 1300 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 DEFB108F-201ENST00000344638 222 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 RNU6-359P-201ENST00000365466 108 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MIR1289-2-201ENST00000408360 111 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AL356320.1-201ENST00000429616 163 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 RPS15AP28-201ENST00000435088 386 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MTCYBP45-201ENST00000435243 565 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 TRIM60P18-201ENST00000441518 828 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 FAM103A2P-201ENST00000444122 354 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 OR6K5P-201ENST00000447050 945 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MTND1P9-201ENST00000453775 944 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 BX322784.1-201ENST00000455793 1077 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MEMO1P3-201ENST00000459811 302 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 DEFB108D-201ENST00000527787 222 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 SETP2-201ENST00000553886 926 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC087465.1-201ENST00000560574 245 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC009063.1-201ENST00000563342 702 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MIR3921-201ENST00000577308 85 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC112220.3-201ENST00000605502 502 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC027449.1-201ENST00000608890 407 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AL590099.1-201ENST00000615276 138 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 MIR6130-201ENST00000619419 109 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 AC091046.2-201ENST00000620775 665 ntBASIC3.11□□□□□ -1.91
NPC1L1Q9UHC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms