Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CENPCP1-201ENST00000533085 2578 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 RNU6-217P-201ENST00000384164 104 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 MIR17-201ENST00000385012 84 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 RSL24D1P4-201ENST00000400938 484 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 HMGB1P17-201ENST00000403495 628 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC023141.4-201ENST00000412031 328 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AL139413.1-201ENST00000421309 217 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 EIF4EP4-201ENST00000424916 578 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AL035407.1-201ENST00000429211 571 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 HMGB1P9-201ENST00000429856 646 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 SNORA31.22-201ENST00000517204 135 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC010186.2-204ENST00000537668 439 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC104229.1-201ENST00000561364 255 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 LARP7P2-201ENST00000575306 125 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 MIR3199-1-201ENST00000582434 88 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC040174.2-201ENST00000602701 465 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AC133794.1-201ENST00000602731 914 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 AL161423.1-201ENST00000613700 262 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 ZNF849P-201ENST00000594711 1566 ntBASIC1.83□□□□□ -2.12
VPS29Q9UBQ0 DBF4P1-201ENST00000412976 1892 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 OR1L1-202ENST00000373686 1083 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 RNU6-1083P-201ENST00000384022 107 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 SNORA46.1-201ENST00000391069 153 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 CIR1P3-201ENST00000405137 479 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AL109913.1-201ENST00000421173 514 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC018630.2-202ENST00000422992 927 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 VN1R42P-201ENST00000424651 344 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC092047.1-201ENST00000424997 240 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 PIGFP3-201ENST00000441918 722 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 MTND2P24-201ENST00000453434 806 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 RPL38P4-201ENST00000502376 214 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC118465.1-201ENST00000513820 1271 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 CYCSP26-201ENST00000534107 320 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AC024224.1-201ENST00000538284 609 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 DUXAP11-201ENST00000603858 526 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 AL590099.1-201ENST00000615276 138 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.82□□□□□ -2.12
VPS29Q9UBQ0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 RNU6-741P-201ENST00000383889 107 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 RNU6-657P-201ENST00000383904 107 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 RNU2-20P-201ENST00000410425 191 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 CCDC58P2-201ENST00000417131 366 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC019178.2-201ENST00000423595 505 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 CDC42P1-201ENST00000456658 548 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 ANXA2P1-201ENST00000505539 926 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC118282.2-201ENST00000508739 374 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 OR5AQ1P-201ENST00000527596 927 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AP003066.2-201ENST00000529375 555 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 MTCO1P40-201ENST00000574371 625 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 MIR4648-201ENST00000580107 72 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC008749.1-201ENST00000597650 306 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AP001486.3-201ENST00000615334 372 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 MIR6130-201ENST00000619419 109 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AL162373.1-201ENST00000620433 407 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 AC104454.1-201ENST00000421341 1401 ntBASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS29Q9UBQ0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 RNU6-253P-201ENST00000384730 105 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 RNU6-750P-201ENST00000390946 107 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 SNORD65C-201ENST00000390962 71 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC092634.6-201ENST00000418558 192 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms