Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORA7.2-201ENST00000364446 145 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 SNORA51.2-201ENST00000364595 132 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 MT-TC-201ENST00000387405 66 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RNU6-278P-201ENST00000390945 109 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AL136116.1-201ENST00000403591 381 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RPL7AP73-201ENST00000413490 353 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 MTCO3P12-201ENST00000416718 547 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC016831.2-201ENST00000417179 352 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RPS17P13-201ENST00000448974 407 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 CACYBPP2-201ENST00000453625 678 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 GMFBP1-201ENST00000467831 427 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 HMGB1P25-201ENST00000468402 607 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ST13P14-201ENST00000474095 734 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AL163973.1-201ENST00000484753 577 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RPL38P4-201ENST00000502376 214 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 FGF7P4-201ENST00000509595 295 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC026726.1-201ENST00000512859 601 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RNU2-10P-201ENST00000516375 211 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 RNA5SP179-201ENST00000517284 121 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AL138976.2-201ENST00000563989 694 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 MIR3186-201ENST00000577404 85 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC091167.4-201ENST00000605079 184 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC084757.4-201ENST00000616350 526 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AL354950.2-201ENST00000617939 290 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC040168.1-201ENST00000623594 991 ntBASIC3.99□□□□□ -1.77
DKK3Q9UBP4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
DKK3Q9UBP4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 RNU6-821P-201ENST00000390995 107 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 MIR1250-201ENST00000408098 113 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 RNA5SP56-201ENST00000410277 118 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 MTND1P14-201ENST00000427400 950 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 MED13P1-201ENST00000428342 171 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 SRIP2-201ENST00000428470 166 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC018644.1-201ENST00000429934 551 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 CBWD4P-201ENST00000445695 655 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC016696.1-201ENST00000446949 318 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC126389.1-201ENST00000477436 290 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC233702.1-201ENST00000482905 502 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC025554.1-201ENST00000505641 188 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 SYF2P1-201ENST00000550658 413 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AL133153.1-201ENST00000557756 303 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC013553.2-201ENST00000604244 589 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC069200.1-201ENST00000609511 323 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AC130324.3-201ENST00000614165 542 ntBASIC3.98□□□□□ -1.77
DKK3Q9UBP4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.98□□□□□ -1.77
DKK3Q9UBP4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 RNU6-996P-201ENST00000365438 107 ntBASIC3.97□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.367-201ENST00000365544 101 ntBASIC3.97□□□□□ -1.77
DKK3Q9UBP4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
DKK3Q9UBP4 RNU6-39P-201ENST00000384344 107 ntBASIC3.97□□□□□ -1.77
DKK3Q9UBP4 Y_RNA.535-201ENST00000384612 99 ntBASIC3.97□□□□□ -1.77
DKK3Q9UBP4 RNU6-1011P-201ENST00000384668 107 ntBASIC3.97□□□□□ -1.77
DKK3Q9UBP4 MIR454-201ENST00000390180 115 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms