Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORD6-201ENST00000365444 73 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC024082.2-201ENST00000434771 238 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC002486.1-201ENST00000435098 391 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 MTND3P10-201ENST00000450967 341 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 RPL21P104-201ENST00000464143 478 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AL049830.2-201ENST00000480072 201 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 RN7SL293P-201ENST00000481765 281 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 Vault.3-201ENST00000516676 95 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 OR4T1P-201ENST00000554933 911 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC010591.1-201ENST00000603941 649 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008277.2-201ENST00000605196 797 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC012443.1-201ENST00000605605 231 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC006023.2-201ENST00000609916 167 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AL355810.1-201ENST00000614629 552 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC104985.2-201ENST00000620598 500 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC243312.2-201ENST00000623340 601 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 U6.105-201ENST00000637379 88 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NCKIPSDQ9NZQ3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 DDX10P1-201ENST00000448545 1933 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-328P-201ENST00000390887 106 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 SOD2P1-201ENST00000396543 562 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 FGF7P8-201ENST00000402994 292 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU4-65P-201ENST00000410473 140 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL109913.1-201ENST00000421173 514 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 CYCSP4-201ENST00000429682 331 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 FCF1P1-201ENST00000432690 571 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 RPS15AP9-201ENST00000439856 381 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 TXNP1-201ENST00000441872 371 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 UBE2V1P7-201ENST00000446395 340 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 MTND5P20-201ENST00000448677 143 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 RN7SL330P-201ENST00000469709 307 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC007182.2-201ENST00000489251 402 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 RANP9-201ENST00000519957 271 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC022616.3-201ENST00000523940 148 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 DEFB108D-201ENST00000527787 222 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AP001646.1-201ENST00000527936 915 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC008011.1-201ENST00000545989 227 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR3690-201ENST00000580266 75 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC099654.5-201ENST00000636479 350 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AL732372.2-225ENST00000642124 456 ntBASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NCKIPSDQ9NZQ3 AC138915.3-201ENST00000562908 1389 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-50P-201ENST00000362356 103 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 RNU6-534P-201ENST00000364877 106 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.63□□□□□ -1.83
NCKIPSDQ9NZQ3 MIR19A-201ENST00000384878 82 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms