Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC091390.3-201ENST00000426478 338 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL451062.2-201ENST00000427515 271 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 RNU6-329P-201ENST00000459618 107 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 RNU6-189P-201ENST00000516120 101 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 SNORA31.8-201ENST00000516327 108 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC022655.2-201ENST00000577280 318 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 MIR4330-201ENST00000579077 105 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 BNIP3P25-201ENST00000596023 559 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL356055.1-201ENST00000602528 446 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AL161729.3-201ENST00000603533 673 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 MIR15A-201ENST00000607334 83 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 U2.17-201ENST00000611454 95 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC009233.1-201ENST00000616477 371 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 AC011944.2-201ENST00000624440 683 ntBASIC3.82□□□□□ -1.8
RLIMQ9NVW2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RLIMQ9NVW2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.58-201ENST00000362807 102 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.154-201ENST00000363624 102 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNU6-512P-201ENST00000364438 103 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNY3P1-201ENST00000365085 102 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNY3-201ENST00000365484 102 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.414-201ENST00000384011 101 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 Y_RNA.490-201ENST00000384413 102 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 BX682237.1-201ENST00000415016 335 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC007919.1-201ENST00000429380 217 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL592045.1-201ENST00000429867 352 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RN7SL303P-201ENST00000469773 251 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RPL31P60-201ENST00000478450 367 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RPL21P93-201ENST00000480465 489 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNU6-927P-201ENST00000516199 100 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 RNA5SP471-201ENST00000516971 106 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AP001804.3-201ENST00000525146 880 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL360157.1-201ENST00000565962 87 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL592436.1-201ENST00000605135 558 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC021646.1-201ENST00000605469 484 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 Z82243.1-201ENST00000609432 473 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL121757.2-201ENST00000611223 313 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC104237.2-201ENST00000612456 443 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AL133216.2-202ENST00000634512 349 ntBASIC3.81□□□□□ -1.8
RLIMQ9NVW2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RLIMQ9NVW2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RNU6-393P-201ENST00000384475 107 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 SNORA16.2-201ENST00000390991 127 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MTND1P14-201ENST00000427400 950 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RPL23AP46-201ENST00000438548 490 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 HMGB1P18-201ENST00000438801 619 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 MTND4P17-201ENST00000470444 350 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RPL7P5-201ENST00000471472 736 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.8□□□□□ -1.8
RLIMQ9NVW2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.8□□□□□ -1.8
RLIMQ9NVW2 RNU6-914P-201ENST00000516749 109 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms