Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC008264.2-201ENST00000610193 3731 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RPL5P18-201ENST00000406671 891 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AC022018.1-201ENST00000430685 241 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 EPS15P1-201ENST00000448836 336 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 SETP11-201ENST00000473027 690 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 MTND3P7-201ENST00000474435 343 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AP004217.1-201ENST00000480579 346 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RPS15AP36-201ENST00000492022 382 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 RNU6-201P-201ENST00000517100 61 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 NRON-201ENST00000517270 370 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AP000907.2-201ENST00000530827 353 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 HSPE1P7-201ENST00000604681 321 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AL355472.4-201ENST00000610233 626 ntBASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RNY3P9-201ENST00000384727 106 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 SNORA48.5-201ENST00000391143 135 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL031121.1-201ENST00000406553 254 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC078974.1-201ENST00000411597 223 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 Z92545.1-201ENST00000411782 234 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RPL35AP12-201ENST00000425362 338 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL365184.2-201ENST00000431139 435 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 USP12PX-201ENST00000432383 1057 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL512286.1-201ENST00000439244 400 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 CBWD4P-201ENST00000445695 655 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RPS27AP8-201ENST00000452665 445 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 MTCO1P42-201ENST00000457379 726 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RNU6-420P-201ENST00000458780 107 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC008481.1-201ENST00000463278 396 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RPL21P8-201ENST00000465083 535 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RPS20P22-201ENST00000473700 357 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 RPS29P26-201ENST00000477483 171 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC034105.3-201ENST00000565294 442 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC005951.2-201ENST00000576282 495 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 MIR3609-201ENST00000582661 80 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 AC010133.1-201ENST00000615809 842 ntBASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC4Q9NTJ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC007785.2-201ENST00000598627 1916 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 RNU6-741P-201ENST00000383889 107 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AL031577.2-201ENST00000404133 280 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 RN7SKP58-201ENST00000411010 305 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AL513331.1-201ENST00000411908 397 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 SPA17P1-201ENST00000416656 452 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AL451054.2-201ENST00000420896 202 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC005094.1-201ENST00000440420 368 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 GDI2P2-201ENST00000445131 608 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 ELOCP30-201ENST00000447108 299 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 KATNBL1P6-201ENST00000453433 915 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC108059.3-201ENST00000456388 214 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 RPF2P2-201ENST00000504693 896 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC006445.2-201ENST00000510061 472 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC118465.1-201ENST00000513820 1271 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 ACTR3BP3-201ENST00000565577 979 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AF038458.1-201ENST00000588406 262 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC005000.2-201ENST00000605468 310 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 OR10AB1P-201ENST00000609613 938 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC004696.1-201ENST00000614345 607 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 AC233263.6-201ENST00000631132 1963 ntBASIC3.72□□□□□ -1.81
SMC4Q9NTJ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms