Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 DSTNP4-201ENST00000399472 474 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 HSPE1P12-201ENST00000412576 301 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 MTATP6P29-201ENST00000415057 132 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC006011.1-201ENST00000442758 349 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 MTND1P17-201ENST00000448961 204 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 FTH1P9-201ENST00000513251 355 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 Y_RNA.721-201ENST00000517207 102 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC090136.1-201ENST00000520009 240 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC120057.2-201ENST00000571520 271 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AL353997.4-201ENST00000586196 166 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 UBE2L4-201ENST00000587688 464 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC104662.1-201ENST00000604448 511 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AL008729.2-201ENST00000606393 473 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC069200.1-201ENST00000609511 323 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC244100.1-202ENST00000621554 382 ntBASIC5.35□□□□□ -1.55
ATG3Q9NT62 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG3Q9NT62 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG3Q9NT62 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 MAPK10-303ENST00000641324 3959 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 RNA5SP22-201ENST00000365393 109 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 Y_RNA.396-201ENST00000383949 103 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC016769.3-201ENST00000396562 315 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 SNORA11.1-201ENST00000408133 129 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC008280.1-201ENST00000418851 412 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AL691449.1-201ENST00000426570 421 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC096632.1-201ENST00000427395 310 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC137499.1-201ENST00000427602 88 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 NOTCH2P1-201ENST00000443481 624 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC005297.2-201ENST00000450430 606 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC097473.1-201ENST00000508142 408 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 RNU6-256P-201ENST00000516747 97 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC008739.3-201ENST00000603262 127 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC018462.2-201ENST00000605375 395 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC100812.1-201ENST00000607622 580 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG3Q9NT62 AC092608.2-201ENST00000624427 218 ntBASIC5.34□□□□□ -1.55
ATG3Q9NT62 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG3Q9NT62 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG3Q9NT62 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.34□□□□□ -1.56
ATG3Q9NT62 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC087190.4-201ENST00000574616 8334 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AP000542.2-201ENST00000623199 6179 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG3Q9NT62 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC019155.1-201ENST00000382242 574 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 RNU6-444P-201ENST00000383988 108 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 MIR195-201ENST00000385194 87 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 SNORD96B-201ENST00000386148 79 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 RNU2-21P-201ENST00000410368 188 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC110792.1-201ENST00000491826 472 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AP000763.2-201ENST00000540641 163 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 RPL21P7-201ENST00000557463 483 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 AC133104.2-201ENST00000615272 193 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 PLCE1P1-201ENST00000622094 305 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG3Q9NT62 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG3Q9NT62 KPNA2P1-201ENST00000458289 1591 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG3Q9NT62 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG3Q9NT62 AL049555.1-201ENST00000562834 1933 ntBASIC5.33□□□□□ -1.56
ATG3Q9NT62 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 AL161912.2-201ENST00000565707 3007 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG3Q9NT62 AL592437.2-201ENST00000421655 2434 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATG3Q9NT62 SNORA63.1-201ENST00000362493 131 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 SNORD46.1-201ENST00000364139 104 ntBASIC5.32□□□□□ -1.56
ATG3Q9NT62 Y_RNA.333-201ENST00000365274 102 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms