Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 MRPL42P2-201ENST00000403169 426 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RPL35AP22-201ENST00000436855 335 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RPS4XP22-201ENST00000480755 780 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC055855.1-201ENST00000489563 579 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 NDUFB4P2-201ENST00000509515 391 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 Y_RNA.672-201ENST00000516289 104 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 SNORA31.20-201ENST00000517111 133 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 HMGN1P28-201ENST00000521340 364 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC126177.3-201ENST00000551839 688 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AL356432.3-201ENST00000568952 465 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AL158211.4-201ENST00000606988 584 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC004908.2-201ENST00000609090 574 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC099778.2-201ENST00000610904 211 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 AC092628.2-201ENST00000622492 339 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 PISRT1-201ENST00000626175 531 ntBASIC3.61□□□□□ -1.83
DDX4Q9NQI0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
DDX4Q9NQI0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC000403.1-201ENST00000613696 3585 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC092447.7-201ENST00000422212 1621 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 SNORA5B-201ENST00000363786 132 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RNU6-7-201ENST00000364784 107 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RNU6-8-201ENST00000365467 107 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 Y_RNA.548-201ENST00000384656 105 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 USP9YP14-201ENST00000430663 563 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RPS12P18-201ENST00000442381 270 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 MTCYBP1-201ENST00000454315 1119 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 TPT1P7-201ENST00000458300 517 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC010401.1-201ENST00000463867 348 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 MTND4LP22-201ENST00000508209 276 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC091826.1-201ENST00000514065 313 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC026801.2-201ENST00000515352 425 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RN7SKP132-201ENST00000516001 208 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RNU1-61P-201ENST00000516107 151 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 SNORA18.6-201ENST00000516792 115 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AP003392.2-201ENST00000527269 208 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 COX6CP3-201ENST00000580869 223 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC073648.5-201ENST00000603502 305 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AL355472.4-201ENST00000610233 626 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC013562.2-201ENST00000611632 603 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 Z99129.1-201ENST00000612510 255 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC090970.3-201ENST00000612566 866 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC072046.2-201ENST00000618366 268 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC012150.2-201ENST00000621300 544 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 MIR4275-201ENST00000636486 87 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 AC116096.1-201ENST00000566804 2314 ntBASIC3.6□□□□□ -1.83
DDX4Q9NQI0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
DDX4Q9NQI0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 MTND5P29-201ENST00000458676 1807 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 OR5J1P-201ENST00000313544 939 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 Y_RNA.517-201ENST00000384551 106 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 RAC1P7-201ENST00000445367 377 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms