Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VIPAS39Q9H9C1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VIPAS39Q9H9C1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-278P-201ENST00000390945 109 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RAB9AP3-201ENST00000412737 573 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 USP9YP13-201ENST00000417797 480 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 HSPD1P21-201ENST00000436541 245 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 MTCO3P45-201ENST00000443036 613 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RAB9AP1-201ENST00000449393 573 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNU7-59P-201ENST00000459101 61 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RPL30P14-201ENST00000482744 348 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RPS27P27-201ENST00000498779 255 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 HSPD1P15-201ENST00000505573 1122 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC006445.2-201ENST00000510061 472 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-1003P-201ENST00000517099 105 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNU6-64P-201ENST00000517119 105 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 RNU1-45P-201ENST00000517191 141 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC023632.4-201ENST00000517783 191 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC060788.1-201ENST00000521318 469 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AF131215.7-201ENST00000602443 707 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC015871.2-201ENST00000603605 948 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 HSPE1P7-201ENST00000604681 321 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC092354.1-201ENST00000606057 376 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC245517.5-201ENST00000611529 162 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC104010.1-201ENST00000616889 150 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC009159.1-201ENST00000618386 642 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 AC027309.3-201ENST00000623419 351 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VIPAS39Q9H9C1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RNY4P16-201ENST00000364768 94 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 SNORA26.8-201ENST00000391306 124 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P75-201ENST00000396599 483 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P28-201ENST00000401418 483 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AL592114.1-201ENST00000403842 483 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MIR1290-201ENST00000408735 78 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AL096701.2-201ENST00000416920 238 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 Z99497.1-201ENST00000421282 135 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AL356583.2-201ENST00000426536 280 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC007919.1-201ENST00000429380 217 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 TIMM9P1-201ENST00000436122 256 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 CR769767.1-201ENST00000436337 346 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MTATP6P30-201ENST00000443540 664 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC009237.8-201ENST00000445492 379 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPS20P20-201ENST00000460498 340 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P39-201ENST00000463605 483 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AL672167.3-201ENST00000465951 960 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC104472.2-201ENST00000469035 601 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 KC877373.1-201ENST00000479066 408 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC233702.1-201ENST00000482905 502 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 LARP1BP2-201ENST00000486594 519 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC093591.1-201ENST00000491435 481 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P129-201ENST00000491732 478 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RPL21P16-201ENST00000495531 483 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 DSTNP2-201ENST00000504533 515 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 ARL4AP2-201ENST00000507378 601 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC026403.1-201ENST00000518938 295 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MTCO1P47-201ENST00000523889 1271 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AP002748.2-201ENST00000528671 348 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 DEFB108A-201ENST00000530110 222 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC008088.1-201ENST00000580993 280 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 Z99497.2-201ENST00000603634 310 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC090970.3-201ENST00000612566 866 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 SDR42E1P2-201ENST00000614861 481 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 MIR6076-201ENST00000617521 113 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 CR392039.5-201ENST00000623201 510 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC034229.5-201ENST00000624258 185 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 AC010149.2-201ENST00000637608 315 ntBASIC2.89□□□□□ -1.95
VIPAS39Q9H9C1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
VIPAS39Q9H9C1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms