Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF38Q9H0F5 KPNA2P1-201ENST00000458289 1591 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 API5P2-201ENST00000397055 1498 ntBASIC4.56□□□□□ -1.68
RNF38Q9H0F5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 ZNF519P1-201ENST00000449011 1626 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.188-201ENST00000363952 111 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RNU5E-6P-201ENST00000365574 115 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 SNORD116-11-201ENST00000383882 92 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RNU6-890P-201ENST00000384121 107 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.473-201ENST00000384333 102 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 SOD2P1-201ENST00000396543 562 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC097374.1-203ENST00000400783 485 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 LAP3P1-201ENST00000403648 294 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 Y_RNA.618-201ENST00000410949 107 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 HMGB3P2-201ENST00000411913 584 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RPL30P2-201ENST00000414021 291 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC009237.10-201ENST00000414112 510 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AL137014.1-201ENST00000420490 1226 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 DEFB109F-201ENST00000491870 277 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RN7SL691P-201ENST00000494487 301 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC108078.2-201ENST00000510750 236 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RNU6-189P-201ENST00000516120 101 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 RNU6-1271P-201ENST00000517049 105 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 MRPL49P2-201ENST00000521066 465 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AL121603.1-201ENST00000553815 142 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 OR11H5P-201ENST00000554039 926 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 NUTF2P8-201ENST00000604593 363 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AL354984.3-201ENST00000604803 325 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 ATP1B3P1-201ENST00000605365 821 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC006157.1-201ENST00000611750 366 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 MIR6128-201ENST00000615528 109 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AC140479.6-201ENST00000633535 357 ntBASIC4.55□□□□□ -1.68
RNF38Q9H0F5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RNF38Q9H0F5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 TPTE2P4-201ENST00000258589 1605 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RNU6-82P-201ENST00000363970 107 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RNU6-1078P-201ENST00000364522 103 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 SNORA75B-201ENST00000384053 137 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 SNORA70C-201ENST00000384538 135 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RNU6-550P-201ENST00000391057 101 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RN7SKP159-201ENST00000410657 292 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RNU4-46P-201ENST00000410818 138 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AL160275.2-201ENST00000412010 394 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC009310.1-201ENST00000414414 451 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC096644.2-201ENST00000429278 159 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 RPL21P23-201ENST00000446654 460 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 NDUFS5P3-201ENST00000450668 321 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC005008.1-201ENST00000456151 612 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 SCARNA18-201ENST00000459004 134 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC108751.2-201ENST00000469993 231 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC008526.1-201ENST00000509149 338 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC007224.1-201ENST00000564410 144 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AL160290.3-201ENST00000604869 165 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AC012443.1-201ENST00000605605 231 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AP001486.3-201ENST00000615334 372 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AL732372.2-225ENST00000642124 456 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 MTND5P30-201ENST00000452896 1731 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 AP000542.2-201ENST00000623199 6179 ntBASIC4.54□□□□□ -1.68
RNF38Q9H0F5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF38Q9H0F5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF38Q9H0F5 MFSD8-242ENST00000641690 4199 ntBASIC4.53□□□□□ -1.68
RNF38Q9H0F5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms