Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 RNA5SP289-201ENST00000362332 137 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 SNORA3A-201ENST00000364113 130 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 HMGB1P17-201ENST00000403495 628 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC027644.1-201ENST00000419595 298 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 VN1R10P-201ENST00000447106 875 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 SEPT14P24-201ENST00000447236 180 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL118520.1-201ENST00000450770 291 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL353691.1-201ENST00000451332 387 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 MTATP6P7-201ENST00000453315 681 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC008379.1-201ENST00000463655 464 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 TRBV12-1-201ENST00000479785 344 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 RN7SL636P-201ENST00000497504 294 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 LRRC37A5P-203ENST00000580181 585 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC068313.1-201ENST00000604028 1008 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AL450472.3-201ENST00000615578 367 ntBASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.94□□□□□ -2.1
CDCA4Q9BXL8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 OR4G2P-202ENST00000641004 1759 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 FAM133CP-201ENST00000332869 704 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 RNU6-1083P-201ENST00000384022 107 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 RPL22P22-201ENST00000395439 379 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 SNORD23.1-201ENST00000408212 104 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 RNU4-53P-201ENST00000410828 140 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 FAM204CP-201ENST00000424489 642 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 SRIP2-201ENST00000428470 166 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 HMGB1P9-201ENST00000429856 646 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 MTND2P5-201ENST00000432656 1006 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AL158053.1-201ENST00000441503 453 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 OSTCP8-201ENST00000445117 448 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 MRPS17P3-201ENST00000465453 385 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 MTCYBP20-201ENST00000524239 1129 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC098483.2-201ENST00000603158 454 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC009314.1-201ENST00000603871 304 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AP003973.1-201ENST00000604639 691 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC107214.2-201ENST00000608204 634 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 VN1R74P-201ENST00000613259 503 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC004009.2-201ENST00000623016 728 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 AC064859.1-201ENST00000624741 174 ntBASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDCA4Q9BXL8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 RNU1-73P-201ENST00000383971 164 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC096649.2-201ENST00000416186 393 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 FO393414.1-201ENST00000428697 1184 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 MICF-203ENST00000432679 129 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 RPS15AP5-201ENST00000436276 388 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 CBWD4P-201ENST00000445695 655 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 HIGD1AP2-201ENST00000446367 280 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 MTND2P24-201ENST00000453434 806 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 LARP1BP2-201ENST00000486594 519 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC023632.1-201ENST00000518463 375 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 MIR3945-201ENST00000581853 98 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AP001542.2-201ENST00000593141 364 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 RPAP2P1-201ENST00000603626 1168 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AC025588.2-201ENST00000604851 466 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 AP001521.1-201ENST00000609150 300 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 MIR7157-201ENST00000635801 60 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 U6.101-201ENST00000637707 76 ntBASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
CDCA4Q9BXL8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms