Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 FRG1HP-204ENST00000617940 757 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MIR6873-201ENST00000622788 63 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC092192.1-201ENST00000633154 1018 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC005832.2-201ENST00000538921 1430 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 SNORD48-201ENST00000364953 64 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 SNORA67.3-201ENST00000384366 140 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 SNORA44-201ENST00000384584 132 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 POLHP1-201ENST00000411806 470 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 YME1L1P1-201ENST00000429435 297 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 MED14P1-201ENST00000430517 648 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 RNA5SP281-201ENST00000516504 135 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 RNU6-362P-201ENST00000516736 90 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 RPL7P20-201ENST00000520308 745 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS25Q9BRG1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 ENSAP3-201ENST00000312710 333 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNU5A-1-201ENST00000362698 116 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNU2-20P-201ENST00000410425 191 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNU2-47P-201ENST00000410649 186 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNU2-63P-201ENST00000410792 194 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 EIF4EP2-201ENST00000422816 654 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC018634.1-201ENST00000437554 401 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 SAP18P1-201ENST00000512058 390 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 SETP12-201ENST00000514068 805 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 RNA5SP148-201ENST00000516527 94 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AP005435.4-201ENST00000529514 284 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 HIGD1AP5-201ENST00000529959 259 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC007151.1-201ENST00000572774 483 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 OR4K8P-201ENST00000578842 1048 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC008739.3-201ENST00000603262 127 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC242628.1-201ENST00000606810 391 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AC009233.1-201ENST00000616477 371 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 AP003400.6-201ENST00000624698 740 ntBASIC1.2□□□□□ -2.22
VPS25Q9BRG1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
VPS25Q9BRG1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 BOLA3P4-201ENST00000418151 400 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 BEND7P1-201ENST00000422058 457 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC063976.3-201ENST00000426849 329 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 RPL26P9-201ENST00000457466 433 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 HSPE1P6-201ENST00000479457 291 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 SLC25A15P5-201ENST00000508033 253 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 RNU6-1256P-201ENST00000516539 103 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 ZNF705CP-201ENST00000530515 889 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 SUB1P3-201ENST00000564581 315 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 MIR4325-201ENST00000583049 90 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC007938.3-201ENST00000604965 623 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC018638.7-201ENST00000605836 1114 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AP000238.1-201ENST00000608759 426 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 MIR6817-201ENST00000615588 66 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 AC010378.1-201ENST00000619270 362 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 LINC00216-201ENST00000623548 1126 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS25Q9BRG1 CDC27P3-201ENST00000635418 1910 ntBASIC1.19□□□□□ -2.22
VPS25Q9BRG1 ZNF29P-201ENST00000225587 168 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms