Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXC2Q99958 CBWD4P-201ENST00000445695 655 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AC007327.1-201ENST00000447461 264 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AC104058.1-201ENST00000448028 297 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.31□□□□□ -2.04
FOXC2Q99958 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXC2Q99958 LARP1BP2-201ENST00000486594 519 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.31□□□□□ -2.04
FOXC2Q99958 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXC2Q99958 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXC2Q99958 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXC2Q99958 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AL353997.4-201ENST00000586196 166 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AP001269.3-201ENST00000588718 329 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AC012119.1-201ENST00000603184 222 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AL161729.4-201ENST00000604650 476 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXC2Q99958 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC013476.2-201ENST00000614456 459 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AL603758.1-201ENST00000618654 241 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AC023510.2-201ENST00000622162 746 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXC2Q99958 AC231657.1-201ENST00000624313 397 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXC2Q99958 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
FOXC2Q99958 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.31□□□□□ -2.04
FOXC2Q99958 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
FOXC2Q99958 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
FOXC2Q99958 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXC2Q99958 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXC2Q99958 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXC2Q99958 RNU1-109P-201ENST00000383960 147 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 RNU6-906P-201ENST00000384700 70 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 ELOCP9-201ENST00000418624 239 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 Z98742.3-201ENST00000418637 326 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL358075.3-201ENST00000426289 226 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL049734.2-201ENST00000441066 616 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXC2Q99958 MTCO2P25-201ENST00000447065 681 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 MTND1P9-201ENST00000453775 944 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 BX322784.1-201ENST00000455793 1077 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AP1S2P1-201ENST00000457344 379 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC005410.1-202ENST00000460347 485 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 RPS20P20-201ENST00000460498 340 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 RPL30P9-201ENST00000465586 330 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC126182.1-201ENST00000478134 357 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AP004217.1-201ENST00000480579 346 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AC021146.8-201ENST00000507455 733 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 RN7SKP43-201ENST00000516173 320 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 UBTFL10-201ENST00000528532 562 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.3□□□□□ -2.04
FOXC2Q99958 MTCO2P15-201ENST00000532655 656 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC007536.1-201ENST00000533382 349 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 TRAV28-201ENST00000557548 323 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXC2Q99958 AC009063.1-201ENST00000563342 702 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC021749.1-201ENST00000604322 607 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AL161734.1-201ENST00000609720 557 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC004696.1-201ENST00000614345 607 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 AC006386.1-201ENST00000619436 415 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXC2Q99958 ZNF72P-201ENST00000425869 1908 ntBASIC2.3□□□□□ -2.04
FOXC2Q99958 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXC2Q99958 AL390862.1-201ENST00000635467 1469 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXC2Q99958 AL161781.1-201ENST00000354277 403 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 Y_RNA.192-201ENST00000363977 102 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 RNU6-1078P-201ENST00000364522 103 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 RNU6-637P-201ENST00000384050 107 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AL356057.2-201ENST00000403318 432 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 RNU4-53P-201ENST00000410828 140 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXC2Q99958 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms