Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AL391840.1-201ENST00000571144 367 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC023575.1-201ENST00000580510 358 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC098848.2-201ENST00000588023 330 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 BNIP3P9-201ENST00000603714 553 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MIR30E-201ENST00000362104 92 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNU6-1097P-201ENST00000363586 107 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNA5SP97-201ENST00000365006 84 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNU6-641P-201ENST00000384006 107 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AL663109.1-201ENST00000411498 844 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC114491.1-201ENST00000416095 246 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 Z74696.2-201ENST00000436514 498 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MTCYBP1-201ENST00000454315 1119 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 TPT1P7-201ENST00000458300 517 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RN7SL459P-201ENST00000481078 302 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC108475.1-201ENST00000507880 950 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNU6-143P-201ENST00000516942 93 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNU6-410P-201ENST00000517006 107 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RNA5SP165-201ENST00000517142 115 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 OR5B19P-201ENST00000531766 928 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MIR4700-201ENST00000578311 74 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC073648.5-201ENST00000603502 305 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 NUTF2P8-201ENST00000604593 363 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC022893.3-201ENST00000607665 437 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AL136295.6-201ENST00000610486 658 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AC079684.1-201ENST00000621405 437 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MIR3653-201ENST00000625572 110 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 AP004289.2-201ENST00000444413 1457 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
CMTM3Q96MX0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CMTM3Q96MX0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RNU6-884P-201ENST00000363889 107 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.194-201ENST00000363985 102 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RNU6-108P-201ENST00000365558 107 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RNU2-68P-201ENST00000410878 191 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC068533.1-201ENST00000418542 415 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AL109913.1-201ENST00000421173 514 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RPL23AP30-201ENST00000432419 501 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AL591212.2-201ENST00000433923 257 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC010618.1-201ENST00000469924 477 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC233702.1-201ENST00000482905 502 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 SNORA31.21-201ENST00000517180 77 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AL391261.3-201ENST00000557194 520 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
CMTM3Q96MX0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms