Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.15□□□□□ -2.23
TTC28Q96AY4 AC012321.1-201ENST00000561622 1588 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.15□□□□□ -2.23
TTC28Q96AY4 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 RNU1-101P-201ENST00000391171 127 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 SNRPEP2-201ENST00000397592 279 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 Z86062.1-201ENST00000406773 777 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 AL591034.1-201ENST00000407447 340 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 RNU2-71P-201ENST00000411395 189 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 AC234064.1-201ENST00000436312 247 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 HMGN2P21-201ENST00000447764 270 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.15□□□□□ -2.23
TTC28Q96AY4 MTND2P8-201ENST00000450555 1025 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.15□□□□□ -2.23
TTC28Q96AY4 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
TTC28Q96AY4 SNORD65-201ENST00000391079 73 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 MTND4P11-201ENST00000417020 1058 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 AC114982.2-201ENST00000461396 358 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 MTCO2P9-201ENST00000503214 694 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 MIR548Y-201ENST00000582739 110 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 RNU6-532P-201ENST00000384318 107 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 Y_RNA.559-201ENST00000384686 107 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 MTND2P16-201ENST00000419987 799 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.14□□□□□ -2.23
TTC28Q96AY4 RNA5SP233-201ENST00000459153 113 ntBASIC1.14□□□□□ -2.23
TTC28Q96AY4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 RNY3-201ENST00000365484 102 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 U8.9-201ENST00000365667 134 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 RNU6-17P-201ENST00000384245 107 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 RNU6-18P-201ENST00000384527 107 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 MIR153-1-201ENST00000384914 90 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.13□□□□□ -2.23
TTC28Q96AY4 RPL7P34-201ENST00000433316 712 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC004854.1-201ENST00000440356 349 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 IPO7P1-201ENST00000442031 636 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 TPMTP4-201ENST00000450749 678 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.13□□□□□ -2.23
TTC28Q96AY4 SEM1P1-201ENST00000506694 209 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC098799.2-201ENST00000509466 868 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 APOOP3-201ENST00000536787 586 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 MTCO3P24-201ENST00000572729 782 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC011468.4-201ENST00000603942 409 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC013244.3-201ENST00000605614 388 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 RPL23AP88-201ENST00000605759 454 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC104307.1-201ENST00000616142 196 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC015726.3-201ENST00000624501 418 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AL359851.1-201ENST00000569460 4997 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC090515.1-201ENST00000465295 476 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC093281.2-201ENST00000510153 597 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC118942.1-201ENST00000529674 1035 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.13□□□□□ -2.23
TTC28Q96AY4 AL158032.1-201ENST00000605401 106 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 MIR4496-201ENST00000635896 61 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC121333.1-201ENST00000567488 2709 ntBASIC1.13□□□□□ -2.23
TTC28Q96AY4 AC073055.1-201ENST00000456901 1621 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 HMGN2P35-201ENST00000412164 270 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 DPPA2P1-201ENST00000428060 556 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 RSL24D1P2-201ENST00000445584 366 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 HMGB1P38-201ENST00000490557 577 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 MZT1P2-201ENST00000604387 248 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 RNU6-233P-201ENST00000410845 141 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 RNA5SP498-201ENST00000411342 120 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 LINC01347-201ENST00000417964 355 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 Z99497.1-201ENST00000421282 135 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 CR848007.2-201ENST00000424918 787 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 GTF2IP12-201ENST00000456547 356 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 RPL21P103-201ENST00000479921 488 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 RPL30P11-201ENST00000495304 339 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 MIR4474-201ENST00000579189 78 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AL133393.1-201ENST00000603277 287 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC016252.1-201ENST00000609721 474 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC055764.2-201ENST00000610089 670 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC091925.1-201ENST00000623204 462 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 AC096656.1-201ENST00000623826 1364 ntBASIC1.12□□□□□ -2.23
TTC28Q96AY4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
TTC28Q96AY4 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
TTC28Q96AY4 SNORA7.2-201ENST00000364446 145 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 RNU6-1251P-201ENST00000364502 107 ntBASIC1.11□□□□□ -2.23
TTC28Q96AY4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms