Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU6-189P-201ENST00000516120 101 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 RNU6-1095P-201ENST00000516148 108 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF1Q92994 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 MIR6758-201ENST00000620653 63 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 AL023881.1-201ENST00000621088 301 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 AC110801.1-201ENST00000623590 212 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC018529.3-201ENST00000624212 2254 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC015813.6-201ENST00000624409 5808 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF1Q92994 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF1Q92994 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BRF1Q92994 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF1Q92994 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 Y_RNA.146-201ENST00000363549 102 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AL360182.1-201ENST00000397433 468 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 SNORA3C-201ENST00000408792 125 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AL139396.1-201ENST00000421137 167 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF1Q92994 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.78□□□□□ -1.64
BRF1Q92994 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.78□□□□□ -1.64
BRF1Q92994 RPS15AP27-201ENST00000449183 343 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AC009220.1-201ENST00000451614 275 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.78□□□□□ -1.64
BRF1Q92994 AC026979.1-201ENST00000492525 396 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 RN7SKP24-201ENST00000515888 284 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.78□□□□□ -1.64
BRF1Q92994 AC025627.2-201ENST00000576220 160 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 MIR4790-201ENST00000577799 79 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AC174048.1-201ENST00000603389 144 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AL670379.10-201ENST00000604330 253 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AL034351.1-201ENST00000605288 668 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 AL670379.9-201ENST00000605428 253 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF1Q92994 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF1Q92994 LINC00901.1-201ENST00000617252 152 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 MIR4275-201ENST00000636486 87 ntBASIC4.78□□□□□ -1.64
BRF1Q92994 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF1Q92994 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF1Q92994 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRF1Q92994 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF1Q92994 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 Y_RNA.399-201ENST00000383955 105 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AL139397.2-201ENST00000404529 772 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 RNU6-370P-201ENST00000411008 104 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC016397.1-201ENST00000412463 242 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 HSPE1P12-201ENST00000412576 301 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF1Q92994 AC245054.2-201ENST00000415639 319 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF1Q92994 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF1Q92994 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF1Q92994 GPM6BP2-201ENST00000432046 144 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF1Q92994 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 GPM6BP1-201ENST00000446387 144 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 MTND1P17-201ENST00000448961 204 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 IFNWP4-201ENST00000453148 294 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF1Q92994 AC010618.1-201ENST00000469924 477 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC010631.1-201ENST00000474150 156 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 RBBP4P6-201ENST00000508098 202 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 HIGD1AP13-201ENST00000509878 289 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.77□□□□□ -1.65
BRF1Q92994 RNU6-273P-201ENST00000516937 96 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AF186190.1-201ENST00000517470 480 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 MRPL49P2-201ENST00000521066 465 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 COPS8P3-201ENST00000526024 482 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC135001.1-201ENST00000544546 283 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 DYNLL1P4-201ENST00000549314 266 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF1Q92994 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF1Q92994 MIR3671-201ENST00000580455 88 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 AC007998.5-201ENST00000622938 237 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 AC243312.2-201ENST00000623340 601 ntBASIC4.77□□□□□ -1.65
BRF1Q92994 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BRF1Q92994 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
BRF1Q92994 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
BRF1Q92994 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF1Q92994 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRF1Q92994 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRF1Q92994 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.76□□□□□ -1.65
BRF1Q92994 RPL32P3-201ENST00000359025 275 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms