Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RNU1-39P-201ENST00000383897 165 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 SNORA5A-201ENST00000384111 134 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 SOD2P1-201ENST00000396543 562 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RNU4-78P-201ENST00000410940 126 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RPL30P2-201ENST00000414021 291 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 ELOCP4-201ENST00000420090 333 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 GTF2IP20-201ENST00000431663 360 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 HMGN2P31-201ENST00000432430 273 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 UBE2V1P13-201ENST00000436983 439 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 TPT1P14-201ENST00000448018 505 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC092001.1-201ENST00000453012 261 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 snoU109.4-201ENST00000458953 143 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RPL23AP41-201ENST00000484754 458 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RN7SL323P-201ENST00000494712 295 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC091951.2-201ENST00000500762 203 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC018710.1-201ENST00000506509 158 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC074250.1-201ENST00000511117 192 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RN7SKP83-201ENST00000516512 178 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 RNA5SP337-201ENST00000517007 109 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC034105.3-201ENST00000565294 442 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 MIR5195-201ENST00000583555 115 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC025449.1-201ENST00000603896 529 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 Z84480.1-201ENST00000605131 311 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AL159972.1-201ENST00000625150 448 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC004925.1-201ENST00000624256 2706 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 MTND4P12-201ENST00000498999 1377 ntBASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATRIPQ8WXE1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 RNU6-821P-201ENST00000390995 107 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 RN7SKP285-201ENST00000410137 318 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 RNU6-908P-201ENST00000410160 94 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 RNU2-9P-201ENST00000410194 145 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 RNU2-47P-201ENST00000410649 186 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC092447.6-201ENST00000414578 210 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 ARF4P2-201ENST00000430209 526 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 NDUFB1P1-201ENST00000435191 180 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 HMGB3P12-201ENST00000438745 556 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 PRDX3P3-201ENST00000447765 522 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC022364.2-201ENST00000457963 554 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AL049830.2-201ENST00000480072 201 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 GMPSP1-201ENST00000514075 579 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC046134.1-201ENST00000514454 666 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 HIF1AP1-201ENST00000553642 175 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC011471.1-201ENST00000585766 187 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AC068790.3-201ENST00000602988 553 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 AL365440.1-201ENST00000436135 2167 ntBASIC4.12□□□□□ -1.75
ATRIPQ8WXE1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 MIR591-201ENST00000385290 95 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RPS4XP8-201ENST00000402039 771 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RNA5SP129-201ENST00000410276 118 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RPS29P4-201ENST00000414733 161 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 ZNF90P2-204ENST00000419323 1075 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 TIMM9P1-201ENST00000436122 256 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RAC1P7-201ENST00000445367 377 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RPS29P31-201ENST00000446147 164 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 MTCYBP18-201ENST00000501056 747 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 HMGN1P11-201ENST00000508668 303 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RNU6-875P-201ENST00000516488 106 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 RNA5SP468-201ENST00000516782 93 ntBASIC4.11□□□□□ -1.75
ATRIPQ8WXE1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms