Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 AC099654.14-201ENST00000638599 341 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNED1Q8TER0 ZNF658B-202ENST00000615961 3375 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
SNED1Q8TER0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNED1Q8TER0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
SNED1Q8TER0 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 Y_RNA.70-201ENST00000362886 110 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNU6-1066P-201ENST00000363573 105 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNU6-1243P-201ENST00000364028 107 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNU4-12P-201ENST00000365233 139 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNA5SP88-201ENST00000365560 109 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 MIR217-201ENST00000384817 110 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 MIR607-201ENST00000385241 96 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 MTCYBP36-201ENST00000404146 440 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNA5SP508-201ENST00000411327 119 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 HMGN1P14-201ENST00000412459 517 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RPL7P10-201ENST00000417407 739 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL109913.1-201ENST00000421173 514 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC009237.2-201ENST00000421358 284 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC092989.1-201ENST00000481235 277 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 MIR4504-201ENST00000577413 92 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 MIR4644-201ENST00000579929 84 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC091304.9-201ENST00000612091 226 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC005332.6-201ENST00000613178 446 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 CR381653.2-201ENST00000624041 768 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 SNORA51.2-201ENST00000364595 132 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RN7SKP226-201ENST00000364912 300 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNED1Q8TER0 RPL31P1-201ENST00000398116 372 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 DSTNP4-201ENST00000399472 474 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL583834.1-201ENST00000406943 343 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 MIR1284-201ENST00000408337 120 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC005517.2-201ENST00000424673 553 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 DNAJC19P4-201ENST00000440115 345 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 MTATP6P30-201ENST00000443540 664 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 VN1R10P-201ENST00000447106 875 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 FDX1P2-201ENST00000450769 375 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RN7SL330P-201ENST00000469709 307 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC003982.1-202ENST00000469928 248 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 RPL9P6-201ENST00000492764 598 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 RNF138P1-201ENST00000502765 546 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC124947.2-202ENST00000552735 133 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC027807.2-201ENST00000616099 408 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC093648.1-201ENST00000623546 606 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC079228.1-201ENST00000624774 1049 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 AC099654.10-201ENST00000640395 161 ntBASIC3.36□□□□□ -1.87
SNED1Q8TER0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNED1Q8TER0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 SNORA72.1-201ENST00000363485 129 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AL121972.1-201ENST00000402023 252 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 RPL23AP47-201ENST00000408017 460 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 USP9YP6-201ENST00000413550 854 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC112220.1-201ENST00000434628 355 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AL662791.1-201ENST00000441992 928 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 MTND3P10-201ENST00000450967 341 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 USP9YP34-201ENST00000453983 808 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 RPL21P41-201ENST00000459863 264 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.35□□□□□ -1.87
SNED1Q8TER0 AC023424.2-201ENST00000493479 777 ntBASIC3.35□□□□□ -1.87
SNED1Q8TER0 FAM92A1P2-202ENST00000504766 877 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms