Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC116337.1-201ENST00000509680 687 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC006445.2-201ENST00000510061 472 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RNA5SP473-201ENST00000516402 125 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RNU1-103P-201ENST00000516502 125 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RNU6-1016P-201ENST00000516689 94 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 MIR5690-201ENST00000583739 73 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 Z69720.2-201ENST00000624755 279 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 SRP72P2-201ENST00000344851 1979 ntBASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLRN3Q8NCR9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 SNORD62.1-201ENST00000362541 86 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNA5SP322-201ENST00000363617 119 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RN7SKP275-201ENST00000364626 301 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNY4P36-201ENST00000391116 96 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL356057.2-201ENST00000403318 432 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MIR1302-11-201ENST00000408051 138 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MIR1302-9-201ENST00000408365 138 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MIR1302-10-201ENST00000408734 138 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNU4-14P-201ENST00000410858 122 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNU6-954P-201ENST00000411355 107 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL354890.1-201ENST00000413730 346 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL353729.1-201ENST00000425044 720 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 GSTM5P1-201ENST00000434751 660 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL138899.2-201ENST00000439139 499 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL450023.3-201ENST00000440592 271 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL354714.3-201ENST00000447284 493 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RPS17P2-201ENST00000461663 408 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RN7SL193P-201ENST00000491708 276 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC092436.3-201ENST00000511788 257 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 BTF3P13-201ENST00000513224 490 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNU6-1170P-201ENST00000515974 106 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RNA5SP271-201ENST00000516700 88 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC013244.1-201ENST00000604279 193 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ELOCP5-201ENST00000604924 333 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MIR1302-2-201ENST00000607096 138 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC133104.2-201ENST00000615272 193 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MIR6128-201ENST00000615528 109 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC073308.1-201ENST00000623696 305 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AL359757.2-201ENST00000624309 274 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 AC010300.1-201ENST00000600671 5134 ntBASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CLRN3Q8NCR9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.84□□□□□ -1.8
CLRN3Q8NCR9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.84□□□□□ -1.8
CLRN3Q8NCR9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AF127577.6-201ENST00000623352 2191 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 RNU6-778P-201ENST00000363269 103 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 RNU1-73P-201ENST00000383971 164 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 SNORA16A-201ENST00000384342 137 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AL445529.1-201ENST00000398713 389 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AL109941.1-201ENST00000401925 229 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AP000567.1-201ENST00000406413 156 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 RPL5P18-201ENST00000406671 891 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AC245054.2-201ENST00000415639 319 ntBASIC3.83□□□□□ -1.8
CLRN3Q8NCR9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms