Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
RTL3Q8N8U3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTL3Q8N8U3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RNU6-270P-201ENST00000364131 105 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RNA5SP88-201ENST00000365560 109 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RPL21P3-201ENST00000395517 478 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 TXNP7-201ENST00000406296 293 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RNU6-920P-201ENST00000410926 92 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 HMGN2P30-201ENST00000423237 256 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC007919.1-201ENST00000429380 217 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC244035.1-201ENST00000430042 390 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 Z82210.1-201ENST00000440037 231 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 KATNBL1P3-201ENST00000443475 909 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC146507.2-201ENST00000460608 476 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC106038.2-201ENST00000520706 568 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 TRAV28-201ENST00000557548 323 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC068135.2-201ENST00000569293 1028 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC005951.2-201ENST00000576282 495 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 TPMTP1-201ENST00000592307 737 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC002545.1-201ENST00000592511 181 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AL136363.1-201ENST00000605349 337 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC022336.2-201ENST00000568966 2538 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 AC000403.1-201ENST00000613696 3585 ntBASIC3.05□□□□□ -1.92
RTL3Q8N8U3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
RTL3Q8N8U3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 ELL2P3-201ENST00000457883 1602 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC009902.3-201ENST00000606235 2172 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 RNU1-39P-201ENST00000383897 165 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 Y_RNA.560-201ENST00000384689 102 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 SNORA48.5-201ENST00000391143 135 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 SEPT2P1-201ENST00000419651 180 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC099548.1-201ENST00000421443 426 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MTCYBP39-201ENST00000437562 491 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 PIGFP3-201ENST00000441918 722 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 DDX3P2-201ENST00000446138 111 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MTCO1P27-201ENST00000448269 226 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AL162389.1-201ENST00000449233 177 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 RPL31P3-201ENST00000458430 332 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC233702.1-201ENST00000482905 502 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MTCYBP43-201ENST00000513621 740 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MIR3200-201ENST00000580767 85 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC060771.1-201ENST00000582031 164 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 NBR2-204ENST00000587322 63 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AF038458.1-201ENST00000588406 262 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AL590229.1-201ENST00000603497 542 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC007494.3-201ENST00000624660 743 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
RTL3Q8N8U3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.04□□□□□ -1.92
RTL3Q8N8U3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RTL3Q8N8U3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.92
RTL3Q8N8U3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTL3Q8N8U3 Y_RNA.77-201ENST00000362962 107 ntBASIC3.03□□□□□ -1.92
RTL3Q8N8U3 RNU1-140P-201ENST00000365040 165 ntBASIC3.03□□□□□ -1.92
RTL3Q8N8U3 RNU6-723P-201ENST00000383973 107 ntBASIC3.03□□□□□ -1.92
RTL3Q8N8U3 MIR767-201ENST00000390228 109 ntBASIC3.03□□□□□ -1.92
RTL3Q8N8U3 RN7SKP140-201ENST00000411196 284 ntBASIC3.03□□□□□ -1.92
RTL3Q8N8U3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.03□□□□□ -1.92
RTL3Q8N8U3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.03□□□□□ -1.92
RTL3Q8N8U3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms