Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 UCA1.1-201ENST00000620952 75 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 AL359740.1-201ENST00000624340 592 ntBASIC1.8□□□□□ -2.12
VPS8Q8N3P4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS8Q8N3P4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 MIR489-201ENST00000384923 84 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 CIR1P3-201ENST00000405137 479 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AL356320.2-201ENST00000417263 507 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AP000949.1-201ENST00000438328 629 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 CABYRP1-201ENST00000465493 1045 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC133963.2-201ENST00000513686 578 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 SNORA31.8-201ENST00000516327 108 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC022634.1-201ENST00000520765 532 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC025918.2-201ENST00000558683 763 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC023824.2-201ENST00000566185 400 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC022662.1-201ENST00000580252 331 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC024619.4-201ENST00000580924 316 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AC012213.4-201ENST00000606457 354 ntBASIC1.79□□□□□ -2.12
VPS8Q8N3P4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS8Q8N3P4 SGO1P2-201ENST00000429458 1589 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 RPL30P12-201ENST00000474666 353 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AL161423.1-201ENST00000613700 262 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AL355810.1-201ENST00000614629 552 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS8Q8N3P4 AC008669.1-201ENST00000565823 2178 ntBASIC1.78□□□□□ -2.12
VPS8Q8N3P4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 SNORD114-22-201ENST00000365423 72 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 TRGVB-201ENST00000453257 471 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 AC105036.1-201ENST00000566222 271 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 SDR42E1P2-201ENST00000614861 481 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 AC097655.1-201ENST00000635075 318 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 OR4G1P-203ENST00000641984 1631 ntBASIC1.77□□□□□ -2.13
VPS8Q8N3P4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS8Q8N3P4 RNY1P14-201ENST00000384426 108 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 OR51A5P-201ENST00000415429 942 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 HMGB1P49-201ENST00000418882 569 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 AL591704.2-201ENST00000421658 181 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS8Q8N3P4 snoU13.18-201ENST00000459483 104 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS8Q8N3P4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS8Q8N3P4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
VPS8Q8N3P4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS8Q8N3P4 SNORD14A-201ENST00000606526 91 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 AC025588.4-201ENST00000615802 908 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 STMN1P1-201ENST00000617809 440 ntBASIC1.76□□□□□ -2.13
VPS8Q8N3P4 RNU1-105P-201ENST00000363470 161 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 OR6K5P-201ENST00000447050 945 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 ANKRD26P4-201ENST00000455755 950 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 PMCHL2-203ENST00000457791 237 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 NDUFB4P2-201ENST00000509515 391 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AC108157.1-201ENST00000510511 539 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 OR4G1P-201ENST00000588632 938 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 HSPE1P7-201ENST00000604681 321 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 AL049737.1-201ENST00000413920 1403 ntBASIC1.75□□□□□ -2.13
VPS8Q8N3P4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
VPS8Q8N3P4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 PTGES3P2-201ENST00000407942 482 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 SNORD56-201ENST00000413522 71 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC092155.2-201ENST00000454675 477 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 COX6CP14-201ENST00000469580 174 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 RPS27P26-201ENST00000494583 239 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 MRPS17P9-201ENST00000511924 393 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC136443.5-201ENST00000603741 370 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AL449363.1-201ENST00000617815 186 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms