Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 USP9YP20-201ENST00000419224 558 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 CALM2P2-201ENST00000428512 440 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 MTCO3P18-201ENST00000440206 761 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AL356535.1-201ENST00000440335 398 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 H2AFZP6-201ENST00000444403 394 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC009220.1-201ENST00000451614 275 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 ANP32BP2-201ENST00000454525 545 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 RN7SL860P-201ENST00000473738 223 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 KC877373.1-201ENST00000479066 408 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 RNU6-875P-201ENST00000516488 106 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 Y_RNA.689-201ENST00000516589 107 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 MIR2114-201ENST00000516645 80 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 RNU6-1153P-201ENST00000516760 105 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC022690.1-201ENST00000526681 550 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AL591424.2-201ENST00000617023 128 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AL354950.2-201ENST00000617939 290 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 MIR3688-2-201ENST00000636963 87 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 MTND5P42-201ENST00000637720 498 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 AC007256.1-201ENST00000392253 2765 ntBASIC3.88□□□□□ -1.79
KRT78Q8N1N4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT78Q8N1N4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RPL32P3-201ENST00000359025 275 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORA62-201ENST00000365493 153 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 Y_RNA.573-201ENST00000384763 105 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 MIR141-201ENST00000384975 95 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 MIR325-201ENST00000385260 98 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORD37.1-201ENST00000390968 65 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RNU6-780P-201ENST00000391030 104 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RNU2-33P-201ENST00000410344 192 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC068533.1-201ENST00000418542 415 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL139413.1-201ENST00000421309 217 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL512844.2-201ENST00000433990 593 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNRPEP4-201ENST00000435815 279 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORA71B-202ENST00000439232 272 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL356010.1-201ENST00000456364 102 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 MTND1P11-201ENST00000456661 876 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC084357.1-201ENST00000473404 255 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC026979.1-201ENST00000492525 396 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RN7SKP122-201ENST00000515923 296 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORA31.3-201ENST00000516029 96 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SNORA20.3-201ENST00000516880 132 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC091516.1-201ENST00000549191 703 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 BNIP3P9-201ENST00000603714 553 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL670379.4-201ENST00000605279 254 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC012409.4-201ENST00000612923 249 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC130324.3-201ENST00000614165 542 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AC233309.1-201ENST00000619522 751 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 ZNF807-201ENST00000328088 1707 ntBASIC3.87□□□□□ -1.79
KRT78Q8N1N4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT78Q8N1N4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
KRT78Q8N1N4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRT78Q8N1N4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms