Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 GDI2P2-201ENST00000445131 608 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 RPL39P40-201ENST00000445481 146 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC055855.1-201ENST00000489563 579 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC091826.1-201ENST00000514065 313 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AP000907.2-201ENST00000530827 353 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 MRPS36P5-201ENST00000551909 298 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC091489.2-201ENST00000566263 604 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 MIR4474-201ENST00000579189 78 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC068790.3-201ENST00000602988 553 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC012119.1-201ENST00000603184 222 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC007038.2-201ENST00000608095 740 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC004908.2-201ENST00000609090 574 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC010338.1-201ENST00000621823 717 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AL138713.1-201ENST00000624026 2130 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 OR4G2P-202ENST00000641004 1759 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AC092593.1-201ENST00000515413 1815 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AL445523.1-201ENST00000451184 1362 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-809P-201ENST00000384461 107 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MIR514A1-201ENST00000385133 98 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AL031577.2-201ENST00000404133 280 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC078974.1-201ENST00000411597 223 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTND2P18-201ENST00000419962 1030 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AL356867.1-201ENST00000429623 299 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTATP6P17-201ENST00000431030 672 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 HMGN2P20-201ENST00000437531 273 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTND1P26-201ENST00000440488 538 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 RPS24P13-201ENST00000442520 397 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTND2P24-201ENST00000453434 806 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 RPS15AP36-201ENST00000492022 382 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTND4LP18-201ENST00000526864 291 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AP000857.1-201ENST00000532151 543 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AL133153.1-201ENST00000557756 303 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC135628.1-201ENST00000568867 534 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 MTCO3P24-201ENST00000572729 782 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC083760.1-201ENST00000589621 670 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 WISP1-OT1-201ENST00000602893 642 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 OR10AB1P-201ENST00000609613 938 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC090115.4-201ENST00000609970 188 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC006111.3-201ENST00000622137 383 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 AC093591.3-201ENST00000634516 308 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.6□□□□□ -1.99
C9orf40Q8IXQ3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RNU5F-7P-201ENST00000363696 115 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RNU1-39P-201ENST00000383897 165 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RPS4XP3-201ENST00000398541 413 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL109755.1-201ENST00000401791 649 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL122016.1-201ENST00000403365 367 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 MTCYBP36-201ENST00000404146 440 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 Z99497.1-201ENST00000421282 135 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 RPS29P6-201ENST00000438196 145 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AL445567.1-201ENST00000439121 144 ntBASIC2.59□□□□□ -1.99
C9orf40Q8IXQ3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms